BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0350.1
(99 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49710.1 | Pentatricopeptide repeat (PPR) superfamily protein... 48 2e-07
>AT3G49710.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr3:18437845-18440010 FORWARD LENGTH=721 | 201606
Length = 721
Score = 47.8 bits (112), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 7 GNESLVVLQRMLDTYNEPTSITFIYVLSACAHTGK 41
G E+L++ QRMLD+ P ITF+ VLSACAH GK
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462