BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0050.1
(216 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67930.1 | Golgi transport complex protein-like protein | Chr... 222 1e-67
>AT1G67930.1 | Golgi transport complex protein-like protein |
Chr1:25474218-25477332 REVERSE LENGTH=832 | 201606
Length = 832
Score = 222 bits (566), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 157/235 (66%), Gaps = 41/235 (17%)
Query: 1 MLVRLEACILQLHDQNNFGANGMDAAIDNSASPYIKELQKYVLHFRSEFLSRLLPSSSSN 60
M +LE+CILQ+HDQN FGA+ DA +DN+AS Y++ELQ+ +LHFR EFLSRLLPS++ N
Sbjct: 598 MRDKLESCILQIHDQN-FGAD--DADMDNNASSYMEELQRSILHFRKEFLSRLLPSAA-N 653
Query: 61 THPSNTETICTRLARTMASRVLIVFIRHASLVRQLSESGKLRMAGDMVELELAIAQNLFP 120
+ + TE+ICTRL R MASRVLI +IRHASLVR LSE GKLRMA DM ELELA+ QNLFP
Sbjct: 654 ANTAGTESICTRLTRQMASRVLIFYIRHASLVRPLSEWGKLRMAKDMAELELAVGQNLFP 713
Query: 121 VEQLGAPYRAFRAFRP-VFLKTSQLGDHPLLQDLP------------------------- 154
VEQLGAPYRA RAFRP VFL+TSQ+G PL+ DLP
Sbjct: 714 VEQLGAPYRALRAFRPLVFLETSQMGSSPLINDLPPSIVLHHLYTRGPDELESPMQKNRL 773
Query: 155 -PLQHSLWMESQGKKKRSWEELKILLMMIMLQILGLEETRSLALYILLEFCPVHP 208
P Q+SLW+++Q ++ + W+ +K L ++I + EF PV+P
Sbjct: 774 SPKQYSLWLDNQ-REDQIWKGIKATLDDYAVKIRSRGDK---------EFSPVYP 818