BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g0180.1
         (186 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1...    52   4e-08
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1...    49   9e-07

>AT1G40390.1 | DNAse I-like superfamily protein |
           Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
          Length = 426

 Score = 52.4 bits (124), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 32  LIIGDLNIILHPSEKLGGQQPNLLHLQHWMDYFQLL---SFMEVPYQGSPFTWSNKKVFP 88
           L++GD N I   +E      P+ + LQ   D    +     +++P +G  +TWSN +   
Sbjct: 123 LVVGDFNQIASVTEHYS-LMPSNISLQGLEDLQACMRDSDLVDLPCRGVLYTWSNHQQDN 181

Query: 89  HLVQQLLDRALASQPWLIDFPHTIVTHLPRIGSDHNPILLNTLSSSP--NSRKPFKYNPY 146
            ++++L DRA+ +  WL  FP       P   SDH   ++  L++SP  + +K FKY  +
Sbjct: 182 PILRKL-DRAIVNGCWLATFPTASAIFDPPSDSDHAACMV-ILNNSPPLSKKKSFKYFSF 239

Query: 147 LSKNQDCVYLIDKQWQR 163
           LS + D +  I   WQ+
Sbjct: 240 LSTHPDFISSILAAWQK 256


>AT1G43760.1 | DNAse I-like superfamily protein |
           Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
          Length = 626

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 3/133 (2%)

Query: 32  LIIGDLNIILHPSEKLGGQQPN--LLHLQHWMDYFQLLSFMEVPYQGSPFTWSNKKVFPH 89
           +++GD + I   S+     Q +  +  L+ + +  +    +++P +G  +TWSN +    
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNP 281

Query: 90  LVQQLLDRALASQPWLIDFPHTIVTHLPRIGSDHNPILLNTLSSSPNSRKPFKYNPYLSK 149
           ++++L DRA+A+  W   FP  I        SDH+P ++   +    S+K F+Y  +LS 
Sbjct: 282 IIRKL-DRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLST 340

Query: 150 NQDCVYLIDKQWQ 162
           +   +  +   W+
Sbjct: 341 HPTFLVSLTVAWE 353


Top