BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0180.1
(186 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 52 4e-08
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 49 9e-07
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 52.4 bits (124), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 32 LIIGDLNIILHPSEKLGGQQPNLLHLQHWMDYFQLL---SFMEVPYQGSPFTWSNKKVFP 88
L++GD N I +E P+ + LQ D + +++P +G +TWSN +
Sbjct: 123 LVVGDFNQIASVTEHYS-LMPSNISLQGLEDLQACMRDSDLVDLPCRGVLYTWSNHQQDN 181
Query: 89 HLVQQLLDRALASQPWLIDFPHTIVTHLPRIGSDHNPILLNTLSSSP--NSRKPFKYNPY 146
++++L DRA+ + WL FP P SDH ++ L++SP + +K FKY +
Sbjct: 182 PILRKL-DRAIVNGCWLATFPTASAIFDPPSDSDHAACMV-ILNNSPPLSKKKSFKYFSF 239
Query: 147 LSKNQDCVYLIDKQWQR 163
LS + D + I WQ+
Sbjct: 240 LSTHPDFISSILAAWQK 256
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 32 LIIGDLNIILHPSEKLGGQQPN--LLHLQHWMDYFQLLSFMEVPYQGSPFTWSNKKVFPH 89
+++GD + I S+ Q + + L+ + + + +++P +G +TWSN +
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNP 281
Query: 90 LVQQLLDRALASQPWLIDFPHTIVTHLPRIGSDHNPILLNTLSSSPNSRKPFKYNPYLSK 149
++++L DRA+A+ W FP I SDH+P ++ + S+K F+Y +LS
Sbjct: 282 IIRKL-DRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLST 340
Query: 150 NQDCVYLIDKQWQ 162
+ + + W+
Sbjct: 341 HPTFLVSLTVAWE 353