BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0250.1
(226 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 166 9e-47
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 166 9e-47
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 101 5e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 58 8e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 166 bits (419), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 22 DIVYGVHVVSQFVGSPTTVHWAVVLRILRYLRGTCFQSLPLSSTFSLTLRAYSDGDWASD 81
DI + V+ +SQF +P H V++IL Y++GT Q L SS + L+ +SD + S
Sbjct: 394 DISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSC 453
Query: 82 RTDRKSITSYCVFLGDSLISWRSKKQTVVSRSSTEAKYRAMAF-TVEIVWLRELLADMGV 140
+ R+S YC+FLG SLISW+SKKQ VVS+SS EA+YRA++F T E++WL + ++ +
Sbjct: 454 KDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL 513
Query: 141 SIPEPTPMCCDNQSAIHIAHNSVFHERTKHIEIDCHFTRCH-FTQGTISFPFVSSTMQIA 199
+ +PT + CDN +AIHIA N+VFHERTKHIE DCH R Q T+S+ F + Q
Sbjct: 514 PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ-- 571
Query: 200 DLFTK 204
D FT+
Sbjct: 572 DGFTE 576
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 166 bits (419), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 22 DIVYGVHVVSQFVGSPTTVHWAVVLRILRYLRGTCFQSLPLSSTFSLTLRAYSDGDWASD 81
DI + V+ +SQF +P H V++IL Y++GT Q L SS + L+ +SD + S
Sbjct: 394 DISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSC 453
Query: 82 RTDRKSITSYCVFLGDSLISWRSKKQTVVSRSSTEAKYRAMAF-TVEIVWLRELLADMGV 140
+ R+S YC+FLG SLISW+SKKQ VVS+SS EA+YRA++F T E++WL + ++ +
Sbjct: 454 KDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL 513
Query: 141 SIPEPTPMCCDNQSAIHIAHNSVFHERTKHIEIDCHFTRCH-FTQGTISFPFVSSTMQIA 199
+ +PT + CDN +AIHIA N+VFHERTKHIE DCH R Q T+S+ F + Q
Sbjct: 514 PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ-- 571
Query: 200 DLFTK 204
D FT+
Sbjct: 572 DGFTE 576
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 101 bits (252), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 22 DIVYGVHVVSQFVGSPTTVHWAVVLRILRYLRGTCFQSLPLSSTFSLTLRAYSDGDWASD 81
DI Y V++V Q + PT + ++ R+LRY++GT F L + L ++A+ D DWA
Sbjct: 116 DISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGC 175
Query: 82 RTDRKSITSYCVFLGDSLISWRSKKQTVVSRSSTEAKYRAMAFT-VEIVW 130
+ R+S T +C FLG ++ISW +K+Q VSRSSTE +YRA+A T E+ W
Sbjct: 176 TSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 57.8 bits (138), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 22 DIVYGVHVVSQFVGSPTTVHWAVVLRILRYLRGTCFQSLPLSSTFSLTLRAYSDGDWASD 81
D+ + V+ +SQF + T V ++L Y++GT Q L S+T L L+A++D DWAS
Sbjct: 9 DLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASC 68
Query: 82 RTDRKSITSYC 92
R+S+T +C
Sbjct: 69 PDTRRSVTGFC 79