BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g0270.1
         (150 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21280.1 | Copia-like polyprotein/retrotransposon | Chr1:7447...    57   3e-10

>AT1G21280.1 | Copia-like polyprotein/retrotransposon |
           Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
          Length = 237

 Score = 57.0 bits (136), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 7/138 (5%)

Query: 6   DDSLQAISVRLNGKNYSYWSFLMRNFLKGKYLWDYIDGTVVKPIDRSKKNFAELSRVWEA 65
           D S+Q +S   +  NY  W    R+FL+    + +IDGT+ KP       F+ L + WE 
Sbjct: 29  DFSIQKLSK--DEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKP-----DPFSPLYQPWEQ 81

Query: 66  NNSKIITWINNSVDNTIGYQLAKFETCREMWFYLADMFQQSNFTTQYKLEADSRNMEQRY 125
            N+ ++ W+ NS+ + +   +   ET  +MW  L  +F        Y+L      + Q  
Sbjct: 82  CNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATLRQGG 141

Query: 126 MSIQEFHAAMSDLWNQLA 143
            S++E+   +S +W +L+
Sbjct: 142 DSVEEYFGKLSKVWMELS 159

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