BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0320.1
(209 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 115 2e-29
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 115 2e-29
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 72 2e-15
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 50 3e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 115 bits (288), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 107/198 (54%), Gaps = 8/198 (4%)
Query: 2 DTPDESHLNVAKRLLRYVKGTLNDGLFFTCEQDFMLIGYSDSDWGRDLDERKSTSGFVFF 61
+ P +H ++L Y+KGT+ GLF++ + + L +SD+ + D R+ST+G+ F
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466
Query: 62 MGYTAFTWSSKKQPIVTLSTCEAEYVAARSMVCHAICLRNMLKHLQCPQVGPTEVFLDNK 121
+G + +W SKKQ +V+ S+ EAEY A + L + LQ P PT +F DN
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526
Query: 122 SAIALAKNPVCHERSKHIDTRYHFVREH-VKEGDIEVMYCKSQDQIADIFTKPLKHDVFE 180
+AI +A N V HER+KHI++ H VRE V + + + +Q D FT+ L +
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRG 584
Query: 181 RLKWMLGMRKLRKFGLRG 198
+ +++ M FGL G
Sbjct: 585 TIMYIVSM-----FGLAG 597
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 115 bits (288), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 107/198 (54%), Gaps = 8/198 (4%)
Query: 2 DTPDESHLNVAKRLLRYVKGTLNDGLFFTCEQDFMLIGYSDSDWGRDLDERKSTSGFVFF 61
+ P +H ++L Y+KGT+ GLF++ + + L +SD+ + D R+ST+G+ F
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466
Query: 62 MGYTAFTWSSKKQPIVTLSTCEAEYVAARSMVCHAICLRNMLKHLQCPQVGPTEVFLDNK 121
+G + +W SKKQ +V+ S+ EAEY A + L + LQ P PT +F DN
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526
Query: 122 SAIALAKNPVCHERSKHIDTRYHFVREH-VKEGDIEVMYCKSQDQIADIFTKPLKHDVFE 180
+AI +A N V HER+KHI++ H VRE V + + + +Q D FT+ L +
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRG 584
Query: 181 RLKWMLGMRKLRKFGLRG 198
+ +++ M FGL G
Sbjct: 585 TIMYIVSM-----FGLAG 597
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 72.4 bits (176), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 1 MDTPDESHLNVAKRLLRYVKGTLNDGLFFTCEQDFMLIGYSDSDWGRDLDERKSTSGFVF 60
M P + ++ KR+LRYVKGT+ GL+ + + DSDW R+ST+GF
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187
Query: 61 FMGYTAFTWSSKKQPIVTLSTCEAEYVA 88
F+G +WS+K+QP V+ S+ E EY A
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRA 215
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 50.4 bits (119), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 7 SHLNVAKRLLRYVKGTLNDGLFFTCEQDFMLIGYSDSDWGRDLDERKSTSGF-----VFF 61
+ + ++L YVKGT+ GLF++ D L ++DSDW D R+S +GF ++F
Sbjct: 27 AQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFCSLVPLWF 86
Query: 62 MG 63
+G
Sbjct: 87 LG 88