BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0350.1
(470 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 355 e-112
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 355 e-112
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 189 7e-57
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 99 4e-24
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 78 2e-17
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 355 bits (910), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/483 (39%), Positives = 281/483 (58%), Gaps = 37/483 (7%)
Query: 1 MEAEMHALHKNNTWTLVPKDSAMNIVDCKWIFRIKQRADGQIERYKARLVARGYSQQHGI 60
M+ E+ A+ +TW + + CKW+++IK +DG IERYKARLVA+GY+QQ GI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYEETFSPVVRPSTIRAVLSLAISGNWTIRAVLSLDVKNAFLNGELSESIFMNQPKIFI- 119
D+ ETFSPV + ++++ +L+++ N+T+ LD+ NAFLNG+L E I+M P +
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLH---QLDISNAFLNGDLDEEIYMKLPPGYAA 218
Query: 120 ---DPKFPNHVCKLRKALYGLKQAPRAWHSKFSSFLLTLGFKQSISDPSMFYHNSSFGLT 176
D PN VC L+K++YGLKQA R W KFS L+ GF QS SD + F ++
Sbjct: 219 RQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFL 278
Query: 177 ILFLYVDDIIVTGSSSSELQNLIHNLKSKFDMSDMGNLTYFLGMKASRDSNSITLTQTKY 236
+ +YVDDII+ ++ + + L LKS F + D+G L YFLG++ +R + I + Q KY
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKY 338
Query: 237 INDLLQK---------------------------YDSYTFRSLVGALQYLTMTRPDICYA 269
DLL + D+ +R L+G L YL +TR DI +A
Sbjct: 339 ALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Query: 270 VNQVSKFMTSPSSIHLIAAKRILRYLKGSINEGLCTSKSLLMHILGFSDADWAGSPDDRR 329
VN++S+F +P H A +IL Y+KG++ +GL S M + FSDA + D RR
Sbjct: 399 VNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRR 458
Query: 330 STSGSCVYLGPNLILWSSKTQPTVARSSTEAEYRAVAHTSADVIWLKHLLQELGFPITTP 389
ST+G C++LG +LI W SK Q V++SS EAEYRA++ + +++WL +EL P++ P
Sbjct: 459 STNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKP 518
Query: 390 PIVHCDNISATYLAVNPILHSKTRHASIDFHFVREQ-VSEKKLVVKFLPGSEQVVDIFTK 448
++ CDN +A ++A N + H +T+H D H VRE+ V + L F EQ D FT+
Sbjct: 519 TLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTE 576
Query: 449 GLS 451
LS
Sbjct: 577 YLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 355 bits (910), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/483 (39%), Positives = 281/483 (58%), Gaps = 37/483 (7%)
Query: 1 MEAEMHALHKNNTWTLVPKDSAMNIVDCKWIFRIKQRADGQIERYKARLVARGYSQQHGI 60
M+ E+ A+ +TW + + CKW+++IK +DG IERYKARLVA+GY+QQ GI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYEETFSPVVRPSTIRAVLSLAISGNWTIRAVLSLDVKNAFLNGELSESIFMNQPKIFI- 119
D+ ETFSPV + ++++ +L+++ N+T+ LD+ NAFLNG+L E I+M P +
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLH---QLDISNAFLNGDLDEEIYMKLPPGYAA 218
Query: 120 ---DPKFPNHVCKLRKALYGLKQAPRAWHSKFSSFLLTLGFKQSISDPSMFYHNSSFGLT 176
D PN VC L+K++YGLKQA R W KFS L+ GF QS SD + F ++
Sbjct: 219 RQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFL 278
Query: 177 ILFLYVDDIIVTGSSSSELQNLIHNLKSKFDMSDMGNLTYFLGMKASRDSNSITLTQTKY 236
+ +YVDDII+ ++ + + L LKS F + D+G L YFLG++ +R + I + Q KY
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKY 338
Query: 237 INDLLQK---------------------------YDSYTFRSLVGALQYLTMTRPDICYA 269
DLL + D+ +R L+G L YL +TR DI +A
Sbjct: 339 ALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Query: 270 VNQVSKFMTSPSSIHLIAAKRILRYLKGSINEGLCTSKSLLMHILGFSDADWAGSPDDRR 329
VN++S+F +P H A +IL Y+KG++ +GL S M + FSDA + D RR
Sbjct: 399 VNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRR 458
Query: 330 STSGSCVYLGPNLILWSSKTQPTVARSSTEAEYRAVAHTSADVIWLKHLLQELGFPITTP 389
ST+G C++LG +LI W SK Q V++SS EAEYRA++ + +++WL +EL P++ P
Sbjct: 459 STNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKP 518
Query: 390 PIVHCDNISATYLAVNPILHSKTRHASIDFHFVREQ-VSEKKLVVKFLPGSEQVVDIFTK 448
++ CDN +A ++A N + H +T+H D H VRE+ V + L F EQ D FT+
Sbjct: 519 TLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTE 576
Query: 449 GLS 451
LS
Sbjct: 577 YLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 189 bits (479), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 136/223 (60%), Gaps = 26/223 (11%)
Query: 178 LFLYVDDIIVTGSSSSELQNLIHNLKSKFDMSDMGNLTYFLGMKASRDSNSITLTQTKYI 237
L LYVDDI++TGSS++ L LI L S F M D+G + YFLG++ + + L+QTKY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 238 NDLLQ-------------------------KY-DSYTFRSLVGALQYLTMTRPDICYAVN 271
+L KY D FRS+VGALQYLT+TRPDI YAVN
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122
Query: 272 QVSKFMTSPSSIHLIAAKRILRYLKGSINEGLCTSKSLLMHILGFSDADWAGSPDDRRST 331
V + M P+ KR+LRY+KG+I GL K+ +++ F D+DWAG RRST
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 182
Query: 332 SGSCVYLGPNLILWSSKTQPTVARSSTEAEYRAVAHTSADVIW 374
+G C +LG N+I WS+K QPTV+RSSTE EYRA+A T+A++ W
Sbjct: 183 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 99.0 bits (245), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 1 MEAEMHALHKNNTWTLVPKDSAMNIVDCKWIFRIKQRADGQIERYKARLVARGYSQQHGI 60
M+ E+ AL +N TW LVP NI+ CKW+F+ K +DG ++R KARLVA+G+ Q+ GI
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DYEETFSPVVRPSTIRAVLSLA------ISGNWTIRAVLSLDV 97
+ ET+SPVVR +TIR +L++A S NW + S+ +
Sbjct: 104 YFVETYSPVVRTATIRTILNVAQQLEVGQSINWMFKMHFSMGI 146
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 78.2 bits (191), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 54/78 (69%)
Query: 258 YLTMTRPDICYAVNQVSKFMTSPSSIHLIAAKRILRYLKGSINEGLCTSKSLLMHILGFS 317
YLT+TRPD+ +AVN++S+F ++ + + A ++L Y+KG++ +GL S + + + F+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 318 DADWAGSPDDRRSTSGSC 335
D+DWA PD RRS +G C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79