BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0390.1
(113 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G29794.1 | zinc finger MYM-type-like protein | Chr3:14884504-... 96 1e-24
AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization... 87 4e-21
AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization... 87 4e-21
AT3G29638.1 | General transcription factor 2-related zinc finger... 78 9e-18
AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization... 44 9e-06
>AT3G29794.1 | zinc finger MYM-type-like protein |
Chr3:14884504-14885709 REVERSE LENGTH=401 | 201606
Length = 401
Score = 96.3 bits (238), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 36 TFI-VNDTPGSGLFQEIQSSLKSFDLKIDDVRGQEYDNGSNMKGYKKGAQRRLLDINLRA 94
TF+ V+DT G LF+E+Q L +FDLKI++VRGQ YDNGSNMKG KG Q+R L+I+ R
Sbjct: 94 TFLKVDDTSGEELFRELQDVLTAFDLKINNVRGQGYDNGSNMKGKHKGVQKRFLEISPRT 153
Query: 95 LYTACGYHSLNLTLSEL 111
YT C HSLNL L ++
Sbjct: 154 FYTPCSCHSLNLALCDM 170
>AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr4:6353172-6355591 FORWARD
LENGTH=733 | 201606
Length = 733
Score = 87.4 bits (215), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 36 TFI-VNDTPGSGLFQEIQSSLKSFDLKIDDVRGQEYDNGSNMKGYKKGAQRRLLDINLRA 94
TF+ V+D G GLF+ + +L + +L I+DVRGQ YDNG NMKG KG Q++LLDIN RA
Sbjct: 321 TFVEVSDKSGEGLFELLCDTLVALNLNINDVRGQGYDNGCNMKGKHKGVQKKLLDINSRA 380
Query: 95 LYTACGYHSLNL 106
YT CG HSLNL
Sbjct: 381 FYTPCGCHSLNL 392
>AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr4:6353172-6355591 FORWARD
LENGTH=733 | 201606
Length = 733
Score = 87.4 bits (215), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 36 TFI-VNDTPGSGLFQEIQSSLKSFDLKIDDVRGQEYDNGSNMKGYKKGAQRRLLDINLRA 94
TF+ V+D G GLF+ + +L + +L I+DVRGQ YDNG NMKG KG Q++LLDIN RA
Sbjct: 321 TFVEVSDKSGEGLFELLCDTLVALNLNINDVRGQGYDNGCNMKGKHKGVQKKLLDINSRA 380
Query: 95 LYTACGYHSLNL 106
YT CG HSLNL
Sbjct: 381 FYTPCGCHSLNL 392
>AT3G29638.1 | General transcription factor 2-related zinc finger
protein | Chr3:11473479-11475559 FORWARD LENGTH=447 |
201606
Length = 447
Score = 77.8 bits (190), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%)
Query: 45 SGLFQEIQSSLKSFDLKIDDVRGQEYDNGSNMKGYKKGAQRRLLDINLRALYTACGYHSL 104
GLF+ + + LKIDDVRGQ YDNGSN+KG K Q+RLLDIN A Y +CG HSL
Sbjct: 177 EGLFELLCYTFGDLKLKIDDVRGQGYDNGSNIKGKHKRVQKRLLDINSIAFYASCGCHSL 236
Query: 105 NLTLSEL 111
NL L+++
Sbjct: 237 NLALADM 243
>AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=564 | 201606
Length = 564
Score = 43.5 bits (101), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 33/70 (47%)
Query: 39 VNDTPGSGLFQEIQSSLKSFDLKIDDVRGQEYDNGSNMKGYKKGAQRRLLDINLRALYTA 98
V +T + L I S L I +RGQ+YD SNMKG G + +L N A Y
Sbjct: 236 VKETFSAFLKCAIDSLFAKHGLSIKQIRGQDYDGASNMKGEFNGLRYLILRENSSAYYIH 295
Query: 99 CGYHSLNLTL 108
C H L L +
Sbjct: 296 CFAHQLQLVV 305