BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0450.1
(710 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 56 2e-09
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 50 4e-07
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 56.2 bits (134), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%)
Query: 537 HRHITELGNTLSFHCSLPKKLWFDAFSTAVFIINRLPTPTLQGLTPFEILFHIPPDYTNL 596
+R I E ++ C LPK DA +TAV IIN+ P+ + P E+ F P Y+ L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 597 RIFGCACYPHLD 608
R FGC Y H D
Sbjct: 62 RRFGCVAYIHCD 73
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 333 QTIAEGPMRNNLYPIEAQCVRSSQDITAAHVTKITTNYDIWHARLGHSHSGTIRQLHQEH 392
+TI +G ++LY ++ ++ A K T +WH+RL H + L ++
Sbjct: 36 RTILKGNRHDSLYILQGSVETGESNL--AETAKDETR--LWHSRLAHMSQRGMELLVKKG 91
Query: 393 KIIVSNINDKPFCKSCELGKRRCLPFTSSSSTTSHPLYMIHCDIWG 438
+ S ++ FC+ C GK + F++ TT +PL +H D+WG
Sbjct: 92 FLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137