BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0460.1
(766 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 251 7e-71
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 251 7e-71
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 135 9e-36
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 110 1e-27
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 89 6e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 251 bits (642), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 125/284 (44%), Positives = 182/284 (64%), Gaps = 11/284 (3%)
Query: 1 MEDEFQALQLNKTWSLVPFNNNMNILGCKWVYKLKQKSDGSIERYKARLVAKGFHQQEGI 60
M+DE A++ TW + N +GCKWVYK+K SDG+IERYKARLVAKG+ QQEGI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYSETFSPVVKVNTIRLVLTIAVTKSWYIRQLDVSNAFLHGQLEEAVYMVQPPGFVQPQK 120
D+ ETFSPV K+ +++L+L I+ ++ + QLD+SNAFL+G L+E +YM PPG+ Q
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 121 E----NYVCHLHKALYGLKQAPRAWFHKFATFLVGYGFQKSTTDHSMFVYHVKSDTVVFL 176
+ N VC+L K++YGLKQA R WF KF+ L+G+GF +S +DH+ F+ + + L
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281
Query: 177 LYVDDIILTGSSQSILSKLIADLSSVFKMKDLGSLAFFLGIEVSHDKSPNSMLLTQNKYT 236
+YVDDII+ ++ + + +L + L S FK++DLG L +FLG+E++ +S + + Q KY
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYA 339
Query: 237 LELLHRAKLLDSEPSKLPVSSRQRVSILDGIRLSAGDITTLTAY 280
L+LL LL +PS +P+ S G GD AY
Sbjct: 340 LDLLDETGLLGCKPSSVPMDPSVTFSAHSG-----GDFVDAKAY 378
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 87/127 (68%)
Query: 262 SILDGIRLSAGDITTLTAYSDSDWAGCPDSRKSTGGYCVFLGSSLISWSSKKQVTVAKSS 321
++ G+ S+ L +SD+ + C D+R+ST GYC+FLG+SLISW SKKQ V+KSS
Sbjct: 427 TVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSS 486
Query: 322 TEAEYKALSTTATEMVWLSYLLDELHCSMNRPFLLYCDNVSAKSLASNPVFHARTKHIEV 381
EAEY+ALS EM+WL+ EL +++P LL+CDN +A +A+N VFH RTKHIE
Sbjct: 487 AEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIES 546
Query: 382 DFHYVRD 388
D H VR+
Sbjct: 547 DCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 251 bits (642), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 125/284 (44%), Positives = 182/284 (64%), Gaps = 11/284 (3%)
Query: 1 MEDEFQALQLNKTWSLVPFNNNMNILGCKWVYKLKQKSDGSIERYKARLVAKGFHQQEGI 60
M+DE A++ TW + N +GCKWVYK+K SDG+IERYKARLVAKG+ QQEGI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYSETFSPVVKVNTIRLVLTIAVTKSWYIRQLDVSNAFLHGQLEEAVYMVQPPGFVQPQK 120
D+ ETFSPV K+ +++L+L I+ ++ + QLD+SNAFL+G L+E +YM PPG+ Q
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 121 E----NYVCHLHKALYGLKQAPRAWFHKFATFLVGYGFQKSTTDHSMFVYHVKSDTVVFL 176
+ N VC+L K++YGLKQA R WF KF+ L+G+GF +S +DH+ F+ + + L
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281
Query: 177 LYVDDIILTGSSQSILSKLIADLSSVFKMKDLGSLAFFLGIEVSHDKSPNSMLLTQNKYT 236
+YVDDII+ ++ + + +L + L S FK++DLG L +FLG+E++ +S + + Q KY
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYA 339
Query: 237 LELLHRAKLLDSEPSKLPVSSRQRVSILDGIRLSAGDITTLTAY 280
L+LL LL +PS +P+ S G GD AY
Sbjct: 340 LDLLDETGLLGCKPSSVPMDPSVTFSAHSG-----GDFVDAKAY 378
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 87/127 (68%)
Query: 262 SILDGIRLSAGDITTLTAYSDSDWAGCPDSRKSTGGYCVFLGSSLISWSSKKQVTVAKSS 321
++ G+ S+ L +SD+ + C D+R+ST GYC+FLG+SLISW SKKQ V+KSS
Sbjct: 427 TVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSS 486
Query: 322 TEAEYKALSTTATEMVWLSYLLDELHCSMNRPFLLYCDNVSAKSLASNPVFHARTKHIEV 381
EAEY+ALS EM+WL+ EL +++P LL+CDN +A +A+N VFH RTKHIE
Sbjct: 487 AEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIES 546
Query: 382 DFHYVRD 388
D H VR+
Sbjct: 547 DCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 135 bits (341), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 117/227 (51%), Gaps = 63/227 (27%)
Query: 175 FLLYVDDIILTGSSQSILSKLIADLSSVFKMKDLGSLAFFLGIEVSHDKSPNSMLLTQNK 234
LLYVDDI+LTGSS ++L+ LI LSS F MKDLG + +FLGI++ P+ + L+Q K
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQTK 60
Query: 235 YTLELLHRAKLLDSE------PSKL-----------PVSSRQRVSILDGIRLSAGDIT-- 275
Y ++L+ A +LD + P KL P R V L + L+ DI+
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120
Query: 276 ------------------------------------------TLTAYSDSDWAGCPDSRK 293
+ A+ DSDWAGC +R+
Sbjct: 121 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 180
Query: 294 STGGYCVFLGSSLISWSSKKQVTVAKSSTEAEYKALSTTATEMVWLS 340
ST G+C FLG ++ISWS+K+Q TV++SSTE EY+AL+ TA E+ W S
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 110 bits (275), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 7/97 (7%)
Query: 1 MEDEFQALQLNKTWSLVPFNNNMNILGCKWVYKLKQKSDGSIERYKARLVAKGFHQQEGI 60
M++E AL NKTW LVP N NILGCKWV+K K SDG+++R KARLVAKGFHQ+EGI
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DYSETFSPVVKVNTIRLVLTIAVTKSWYIRQLDVSNA 97
+ ET+SPVV+ TIR +L +A +QL+V +
Sbjct: 104 YFVETYSPVVRTATIRTILNVA-------QQLEVGQS 133
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 542 VDYYKGLLGTEHQNDEEEDILMSFEFPRTIDVDAARI-------LDGPVSSNEIVVTLST 594
V YY LLG++ DIL R D+ R L S EI +
Sbjct: 489 VAYYTHLLGSD------SDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFA 542
Query: 595 VGSEKAPGPDGFSYLFYKICWPIVGTDFIRTVQCFFRSGHLLREVNSTLISLIPKIANPS 654
+ KAPGPD F+ F+ W +V I V+ FFR+GHLL+ N+T I+LIPK+
Sbjct: 543 MPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVD 602
Query: 655 SLSDYRPISCYNVVYKCIT 673
LS +RP+SC VVYK IT
Sbjct: 603 QLSMFRPVSCCTVVYKIIT 621