BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0480.1
(208 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30230.1 | 6%2C7-dimethyl-8-ribityllumazine synthase | Chr2:1... 169 3e-53
AT1G06980.1 | 6%2C7-dimethyl-8-ribityllumazine synthase | Chr1:2... 158 3e-49
AT1G29195.1 | phosphatidylinositol 4-phosphate 5-kinase MSS4-lik... 121 2e-34
AT5G50090.1 | D-ribose-binding periplasmic protein | Chr5:203699... 47 2e-06
>AT2G30230.1 | 6%2C7-dimethyl-8-ribityllumazine synthase |
Chr2:12897156-12897689 FORWARD LENGTH=177 | 201606
Length = 177
Score = 169 bits (427), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 129/197 (65%), Gaps = 24/197 (12%)
Query: 1 MGNSLRCCLACVIPCGALDVIRIVHLNGQVEELTRSISAGEVLKANPNYVLSKPSSSQGM 60
MGNSLRCCLACV+PCGALD+IRIVHLNG V+E+T ++AGE+L+ANPN+VLSKP SQG+
Sbjct: 1 MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKP-CSQGV 59
Query: 61 VRRILILSPDSELKRGNIYFLIPASSVPERKKINDTNNISVEVKDNNKIKASNCNKKIES 120
VR+ILILSP+SELKRG+IYFLIP +S+PE+KK + C KK
Sbjct: 60 VRKILILSPESELKRGSIYFLIPDTSMPEKKKTKKRKEL-------------RCRKKPLE 106
Query: 121 CQNTDTNTNTNTRIDIDTKKIGNIVSNTMTNKEELVQMDCVKENIPPEKKSTRHRRRASR 180
N + + +T D+D + +T E+ ++ + E + K RHRR+ SR
Sbjct: 107 SGNDINSDHVSTNKDLD--------GHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSR 158
Query: 181 AS--KDWKPHLESISED 195
++ W+PHL+SI+ED
Sbjct: 159 SASVSTWRPHLDSITED 175
>AT1G06980.1 | 6%2C7-dimethyl-8-ribityllumazine synthase |
Chr1:2143248-2143757 REVERSE LENGTH=169 | 201606
Length = 169
Score = 158 bits (400), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 123/196 (62%), Gaps = 30/196 (15%)
Query: 1 MGNSLRCCLACVIPCGALDVIRIVHLNGQVEELTRSISAGEVLKANPNYVLSKPSSSQGM 60
MGNSLRCCLACV+PCGALD+IRIVHLNG VEE+TRSI+AGE+L+ANPN+VLSKP SQG+
Sbjct: 1 MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKP-CSQGV 59
Query: 61 VRRILILSPDSELKRGNIYFLIPASSVPERK-KINDTNNISVEVKDNNKIKASNCNKKIE 119
VR+ILILSP+SELKRG+IYFLIP SS+PE+K + DT +++ + A K E
Sbjct: 60 VRKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAAGREIKGDE 119
Query: 120 SCQNTDTNTNTNTRIDIDTKKIGNIVSNTMTNKEELVQMDCVKENIPPEKKSTRHRRRAS 179
C + + K + +VS+ T KE R R S
Sbjct: 120 EC------------VKLCEKYLEEVVSSASTGKE----------------HRHRRRHSRS 151
Query: 180 RASKDWKPHLESISED 195
+ W+P L+SISED
Sbjct: 152 ASVSTWRPLLDSISED 167
>AT1G29195.1 | phosphatidylinositol 4-phosphate 5-kinase MSS4-like
protein | Chr1:10202673-10203254 REVERSE LENGTH=193 |
201606
Length = 193
Score = 121 bits (303), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 22/202 (10%)
Query: 1 MGNSLRCCLACVIPCGALDVIRIVHLNGQVEELTRSISAGEVLKANPNYVLSKPSSSQG- 59
M ++RCC+AC++PCGALDVIRIVH NG VEE++ +I+A E++KA+P +VL KPSS
Sbjct: 1 MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60
Query: 60 -------MVRRILILSPDSELKRGNIYFLIPASSVPERKKINDTNNISVEVKDNNKIKAS 112
+I+I+ P++EL+RG IYFL+PA+ + K I E + N +
Sbjct: 61 HDERDVISATKIVIVPPEAELQRGKIYFLMPAT---KSDKCAGGGKIRREKSNANAVVKK 117
Query: 113 NCNKKIESCQNTDTNTNTNTRIDIDTKKIGNIVSNTMTNKEELVQMDCVKENIPPEKKST 172
+ + ++ D N D+ K K+ L+ D I EK +T
Sbjct: 118 RSQYRRQH-RDGDEKCNGGESNDVKDKNY---------EKDLLISSDRYLTEILSEKVAT 167
Query: 173 RHRRRASRASKDWKPHLESISE 194
+ RR R W+PHLESISE
Sbjct: 168 QKDRRKGRVGV-WRPHLESISE 188
>AT5G50090.1 | D-ribose-binding periplasmic protein |
Chr5:20369961-20370878 FORWARD LENGTH=159 | 201606
Length = 159
Score = 46.6 bits (109), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 56/194 (28%)
Query: 15 CGALDVIRIV--HLNGQVEELTRSISAGEVLKANPNYVLS----------KPSSSQGMVR 62
C A+D R+V H NG+ E+L+ +SA V+K NP + +S S G +R
Sbjct: 4 CQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHGGPLR 63
Query: 63 --RILILSPDSELKRGNIYFLIPASSVPERKKINDTNNISVEVKDNNKIKASNCNKKIES 120
RI +L P L G++Y LI V + A C+K +
Sbjct: 64 LTRIKLLRPTDTLVLGHVYRLITTKEV------------------MKGLMAKKCSKLKKE 105
Query: 121 CQNTDTNTNTNTRIDIDTKKIGNIVSNTMTNKEELVQMDCVKENIPPEKKSTRHRRRASR 180
+ +D D ++ +++T + E+ +QM KK + R R SR
Sbjct: 106 SKGSD-----------DKLEMVKAINSTKLDNEDQLQM----------KKQEKERSRISR 144
Query: 181 ASKDWKPHLESISE 194
+ W+P L+SISE
Sbjct: 145 S---WQPSLQSISE 155