BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0490.1
(418 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 202 4e-57
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 202 4e-57
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 125 3e-34
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 202 bits (515), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 156/269 (57%), Gaps = 23/269 (8%)
Query: 160 PPCHQMTTRSKLGVHRPKYLPDYVSH---------------YSVYHPLPQAYMGLLDIPA 204
P H R++ +P YL DY H Y PL +++ +
Sbjct: 29 PSVHTSHRRTR----KPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAK 84
Query: 205 EPTTYKQASKHPEWCQAMEDEIKALEQNETWSLVPASPSMNILGCKWVFKTKLKADGTIE 264
EP+TY +A + WC AM+DEI A+E TW + P+ +GCKWV+K K +DGTIE
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 265 RHKAGLVAKGFHQLDGLDYSETFSPVVKSSTTRVVPTMSVSCGWNIKQLDVSNAFLHGVL 324
R+KA LVAKG+ Q +G+D+ ETFSPV K ++ +++ +S + + QLD+SNAFL+G L
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 325 EEDVSMMQPPDFIAPN----KPSYVCHLHKSLYGLKKAPRSWFTRFSDFLLHYGFQKSAT 380
+E++ M PP + A P+ VC+L KS+YGLK+A R WF +FS L+ +GF +S +
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 381 DHSMFVFTKGKDTPILLLYGDDIILTGSS 409
DH+ F+ +L+Y DDII+ ++
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNN 293
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 202 bits (515), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 156/269 (57%), Gaps = 23/269 (8%)
Query: 160 PPCHQMTTRSKLGVHRPKYLPDYVSH---------------YSVYHPLPQAYMGLLDIPA 204
P H R++ +P YL DY H Y PL +++ +
Sbjct: 29 PSVHTSHRRTR----KPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAK 84
Query: 205 EPTTYKQASKHPEWCQAMEDEIKALEQNETWSLVPASPSMNILGCKWVFKTKLKADGTIE 264
EP+TY +A + WC AM+DEI A+E TW + P+ +GCKWV+K K +DGTIE
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 265 RHKAGLVAKGFHQLDGLDYSETFSPVVKSSTTRVVPTMSVSCGWNIKQLDVSNAFLHGVL 324
R+KA LVAKG+ Q +G+D+ ETFSPV K ++ +++ +S + + QLD+SNAFL+G L
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 325 EEDVSMMQPPDFIAPN----KPSYVCHLHKSLYGLKKAPRSWFTRFSDFLLHYGFQKSAT 380
+E++ M PP + A P+ VC+L KS+YGLK+A R WF +FS L+ +GF +S +
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 381 DHSMFVFTKGKDTPILLLYGDDIILTGSS 409
DH+ F+ +L+Y DDII+ ++
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNN 293
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 125 bits (315), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 87/137 (63%), Gaps = 18/137 (13%)
Query: 165 MTTRSKLGVHR--PKYLPDYVSHYSVYHPLPQAYMGLLDIPAEPTTYKQASKHPEWCQAM 222
M TRSK G+++ PKY + I EP + A K P WCQAM
Sbjct: 1 MLTRSKAGINKLNPKYSLTITT----------------TIKKEPKSVIFALKDPGWCQAM 44
Query: 223 EDEIKALEQNETWSLVPASPSMNILGCKWVFKTKLKADGTIERHKAGLVAKGFHQLDGLD 282
++E+ AL +N+TW LVP + NILGCKWVFKTKL +DGT++R KA LVAKGFHQ +G+
Sbjct: 45 QEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIY 104
Query: 283 YSETFSPVVKSSTTRVV 299
+ ET+SPVV+++T R +
Sbjct: 105 FVETYSPVVRTATIRTI 121