BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0500.1
(260 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 227 4e-68
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 227 4e-68
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 209 1e-67
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 84 2e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 227 bits (579), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 156/245 (63%), Gaps = 1/245 (0%)
Query: 1 MKDLGALHFFLGIEVHPSSSLGLLLTQKKYTLELLQKADLMDCKPSATPIPYGKRLSVSD 60
++DLG L +FLG+E+ S++ G+ + Q+KY L+LL + L+ CKPS+ P+ S
Sbjct: 310 LRDLGPLKYFLGLEIARSAA-GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHS 368
Query: 61 GELLADPTFYRSLVGGLQYLTMTRPDISFRVNYVAQFMHSPTDSHLHLAKIILKYLKGTL 120
G D YR L+G L YL +TR DISF VN ++QF +P +H IL Y+KGT+
Sbjct: 369 GGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 121 GAGIHITPADLTSLRAYSDSDWGGCPDSRRSTSGFCVFLGKSLVAWSSKKQSIVARSSTE 180
G G+ + L+ +SD+ + C D+RRST+G+C+FLG SL++W SKKQ +V++SS E
Sbjct: 429 GQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 181 AEYKSLSVAASELLWICYVLGEFGVSVSPPFQLFCDNMGAKHLAMNLVFHAHTKHIEIDY 240
AEY++LS A E++W+ E + +S P LFCDN A H+A N VFH TKHIE D
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 241 HFVRE 245
H VRE
Sbjct: 549 HSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 227 bits (579), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 156/245 (63%), Gaps = 1/245 (0%)
Query: 1 MKDLGALHFFLGIEVHPSSSLGLLLTQKKYTLELLQKADLMDCKPSATPIPYGKRLSVSD 60
++DLG L +FLG+E+ S++ G+ + Q+KY L+LL + L+ CKPS+ P+ S
Sbjct: 310 LRDLGPLKYFLGLEIARSAA-GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHS 368
Query: 61 GELLADPTFYRSLVGGLQYLTMTRPDISFRVNYVAQFMHSPTDSHLHLAKIILKYLKGTL 120
G D YR L+G L YL +TR DISF VN ++QF +P +H IL Y+KGT+
Sbjct: 369 GGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 121 GAGIHITPADLTSLRAYSDSDWGGCPDSRRSTSGFCVFLGKSLVAWSSKKQSIVARSSTE 180
G G+ + L+ +SD+ + C D+RRST+G+C+FLG SL++W SKKQ +V++SS E
Sbjct: 429 GQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 181 AEYKSLSVAASELLWICYVLGEFGVSVSPPFQLFCDNMGAKHLAMNLVFHAHTKHIEIDY 240
AEY++LS A E++W+ E + +S P LFCDN A H+A N VFH TKHIE D
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 241 HFVRE 245
H VRE
Sbjct: 549 HSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 209 bits (533), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 141/197 (71%), Gaps = 6/197 (3%)
Query: 1 MKDLGALHFFLGIEV--HPSSSLGLLLTQKKYTLELLQKADLMDCKPSATPIPYGKRLSV 58
MKDLG +H+FLGI++ HPS GL L+Q KY ++L A ++DCKP +TP+P SV
Sbjct: 33 MKDLGPVHYFLGIQIKTHPS---GLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSV 89
Query: 59 SDGELLADPTFYRSLVGGLQYLTMTRPDISFRVNYVAQFMHSPTDSHLHLAKIILKYLKG 118
S + DP+ +RS+VG LQYLT+TRPDIS+ VN V Q MH PT + L K +L+Y+KG
Sbjct: 90 STAKY-PDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKG 148
Query: 119 TLGAGIHITPADLTSLRAYSDSDWGGCPDSRRSTSGFCVFLGKSLVAWSSKKQSIVARSS 178
T+ G++I +++A+ DSDW GC +RRST+GFC FLG ++++WS+K+Q V+RSS
Sbjct: 149 TIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSS 208
Query: 179 TEAEYKSLSVAASELLW 195
TE EY++L++ A+EL W
Sbjct: 209 TETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 84.3 bits (207), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 79 YLTMTRPDISFRVNYVAQFMHSPTDSHLHLAKIILKYLKGTLGAGIHITPADLTSLRAYS 138
YLT+TRPD++F VN ++QF + + + +L Y+KGT+G G+ + L+A++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 139 DSDWGGCPDSRRSTSGFC 156
DSDW CPD+RRS +GFC
Sbjct: 62 DSDWASCPDTRRSVTGFC 79