BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0520.1
(663 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 176 6e-46
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 176 6e-46
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 64 4e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 176 bits (446), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 153/266 (57%), Gaps = 15/266 (5%)
Query: 393 RSEAKGYTQKEGIDCHETFSPVSKKDSLRIIMALVAHFDLELHQMDVNTAFLNGHLGEEV 452
R AKGYTQ+EGID ETFSPV K S+++I+A+ A ++ LHQ+D++ AFLNG L EE+
Sbjct: 149 RLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEI 208
Query: 453 YMVQPEGFR----DENDHHLVCKLRKSIYGLKQASRQWYLKFHNVITSFGFTENIVDQCI 508
YM P G+ D + VC L+KSIYGLKQASRQW+LKF + FGF ++ D
Sbjct: 209 YMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTY 268
Query: 509 YLKVCGSKYIFLVLYVDDILLATSDLGLLHETKKFLSQTFEMKDLGEASNVIGIEIHRDR 568
+LK+ + ++ +++YVDDI++ +++ + E K L F+++DLG +G+EI R
Sbjct: 269 FLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--R 326
Query: 569 SKRSLGLSQKAYIKRILERFRMHKCASLVAPIAKGEKLTQSQCPHNALEQGEMKDI-PYA 627
S + + Q+ Y +L+ + C P+ + A G+ D Y
Sbjct: 327 SAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS-------AHSGGDFVDAKAYR 379
Query: 628 SAVGSLLYAQVCTRPDLAFVVGLLGR 653
+G L+Y Q+ TR D++F V L +
Sbjct: 380 RLIGRLMYLQI-TRLDISFAVNKLSQ 404
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 176 bits (446), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 153/266 (57%), Gaps = 15/266 (5%)
Query: 393 RSEAKGYTQKEGIDCHETFSPVSKKDSLRIIMALVAHFDLELHQMDVNTAFLNGHLGEEV 452
R AKGYTQ+EGID ETFSPV K S+++I+A+ A ++ LHQ+D++ AFLNG L EE+
Sbjct: 149 RLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEI 208
Query: 453 YMVQPEGFR----DENDHHLVCKLRKSIYGLKQASRQWYLKFHNVITSFGFTENIVDQCI 508
YM P G+ D + VC L+KSIYGLKQASRQW+LKF + FGF ++ D
Sbjct: 209 YMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTY 268
Query: 509 YLKVCGSKYIFLVLYVDDILLATSDLGLLHETKKFLSQTFEMKDLGEASNVIGIEIHRDR 568
+LK+ + ++ +++YVDDI++ +++ + E K L F+++DLG +G+EI R
Sbjct: 269 FLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--R 326
Query: 569 SKRSLGLSQKAYIKRILERFRMHKCASLVAPIAKGEKLTQSQCPHNALEQGEMKDI-PYA 627
S + + Q+ Y +L+ + C P+ + A G+ D Y
Sbjct: 327 SAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS-------AHSGGDFVDAKAYR 379
Query: 628 SAVGSLLYAQVCTRPDLAFVVGLLGR 653
+G L+Y Q+ TR D++F V L +
Sbjct: 380 RLIGRLMYLQI-TRLDISFAVNKLSQ 404
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 518 IFLVLYVDDILLATSDLGLLHETKKFLSQTFEMKDLGEASNVIGIEIHRDRSKRSLGLSQ 577
++L+LYVDDILL S LL+ LS TF MKDLG +GI+I S L LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQ 58
Query: 578 KAYIKRILERFRMHKCASLVAPIAKGEKLTQSQCPHNALEQGEMKDIPYASAVGSLLYAQ 637
Y ++IL M C + P+ KL S + + + I VG+L Y
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPL--KLNSSVSTAKYPDPSDFRSI-----VGALQYLT 111
Query: 638 VCTRPDLAFVVGLL 651
+ TRPD+++ V ++
Sbjct: 112 L-TRPDISYAVNIV 124