BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0610.1
(325 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G04880.1 | HMG (high mobility group) box protein with ARID/BR... 234 1e-73
AT3G13350.1 | HMG (high mobility group) box protein with ARID/BR... 224 4e-71
AT1G76110.1 | HMG (high mobility group) box protein with ARID/BR... 185 7e-56
AT1G55650.1 | HMG (high mobility group) box protein with ARID/BR... 178 3e-53
AT2G17410.2 | ARID/BRIGHT DNA-binding domain-containing protein ... 47 2e-05
>AT1G04880.1 | HMG (high mobility group) box protein with
ARID/BRIGHT DNA-binding domain-containing protein |
Chr1:1376106-1378264 REVERSE LENGTH=448 | 201606
Length = 448
Score = 234 bits (597), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 183/307 (59%), Gaps = 33/307 (10%)
Query: 43 QRDLGLNESYIAPEATYEQVTQDADLFHKTLKNLHGSLGTKITVPTIGGKALDLYQLFVQ 102
Q + +N + PEATYE V D LF +L+ LH LGTK VP IGG+ LDL++LFV+
Sbjct: 9 QGSVPMNNVCVTPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVE 68
Query: 103 VTSRGGLAKVIQNRQWKEIIAVFNFPVTITNASFVLRKYYMSLLHHYEQVYFRREN---K 159
VTSRGG+ K++ R+WKE+ A F FP T TNAS+VLRKYY SLL++YEQ+YF R N
Sbjct: 69 VTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIP 128
Query: 160 PFSLTYVGNSP------VGASSSLQTQCATNPENGTNTSDIPANSQICSGSRVSGTIDGK 213
P S+ P + S LQ T P+ NT++ S +GS V G IDGK
Sbjct: 129 PDSMQSPSARPCFIQGAIRPSQELQALTFT-PQPKINTAEFLGGS--LAGSNVVGVIDGK 185
Query: 214 FDYGYLVTVTFGSEKLKGVLYHV----------PHDSH-VSANNTNDTLLPR-------- 254
F+ GYLVTVT GSE+LKGVLY + P SH V N N + P+
Sbjct: 186 FESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTK 245
Query: 255 -RRNRKRSRRADSDPSRPNPNRSGYNFFFSENYASLKSSHDDGQEKTISTKMGNMWSQLS 313
RR RK+S DP P PNRSGYNFFF+E +A LK H G+++ IS +G +W++L+
Sbjct: 246 RRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLH-PGKDRDISRMIGELWNKLN 304
Query: 314 EAEKQVF 320
E EK ++
Sbjct: 305 EDEKLIY 311
>AT3G13350.1 | HMG (high mobility group) box protein with
ARID/BRIGHT DNA-binding domain-containing protein |
Chr3:4335721-4337804 REVERSE LENGTH=319 | 201606
Length = 319
Score = 224 bits (570), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 170/268 (63%), Gaps = 19/268 (7%)
Query: 57 ATYEQVTQDADLFHKTLKNLHGSLGTKITVPTIGGKALDLYQLFVQVTSRGGLAKVIQNR 116
A Y+ + +++ LF + L+ G + VPT+GG LDL++LF++VTSRGG+ +V+++R
Sbjct: 34 AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93
Query: 117 QWKEIIAVFNFPVTITNASFVLRKYYMSLLHHYEQVYFRRENKPFSLTYVGNSPVGASSS 176
+WKE+I F+FP TIT+ASFVLRKYY+ L E VY+ KP S S A S
Sbjct: 94 KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYL--EKPVSSL---QSTDEALKS 148
Query: 177 LQTQCATNPENGTNTSDIPANSQICSGSRVSGTIDGKFDYGYLVTVTFGSEKLKGVLYHV 236
L + + NPE G + + G V G IDGKFD GYLVT+ GS++LKGVLYH+
Sbjct: 149 LANE-SPNPEEGIDEPQV--------GYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHI 199
Query: 237 PHDSHVSAN--NTNDTLL--PRRRNRKRSRRADSDPSRPNPNRSGYNFFFSENYASLKSS 292
P S T ++ +RR+RK+S+ A D +P +RSGYNFFF+E YA LK
Sbjct: 200 PQTPSQSQQTMETPSAIVQSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPE 259
Query: 293 HDDGQEKTISTKMGNMWSQLSEAEKQVF 320
+ GQE++I+ K+G+MWS L+E+EKQV+
Sbjct: 260 Y-HGQERSITKKIGHMWSNLTESEKQVY 286
>AT1G76110.1 | HMG (high mobility group) box protein with
ARID/BRIGHT DNA-binding domain-containing protein |
Chr1:28555287-28557465 REVERSE LENGTH=338 | 201606
Length = 338
Score = 185 bits (469), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 157/286 (54%), Gaps = 13/286 (4%)
Query: 50 ESYIAPEATYEQVTQDADLFHKTLKNLHGSLGTKITVPTIGGKALDLYQLFVQVTSRGGL 109
+ Y P A +E V +D+ +F TL+ H + TK +P IGGK LDL+ L+V+VT RGG
Sbjct: 25 KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGY 84
Query: 110 AKVIQNRQWKEIIAVFNFPVTITNASFVLRKYYMSLLHHYEQVYFRRENKPFSLTYVGNS 169
KV+ ++W+E+ VF F T T+ASFVLRK+Y++LL HYEQV+ P L +
Sbjct: 85 EKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPL-LHPIATF 143
Query: 170 PVGASSSLQTQCATNPENGTNTSDIPANSQICSGSRVSGTIDGKFDYGYLVTVTFGSEKL 229
S+S + + SQ S GTI+GKFD GYLV V GSE L
Sbjct: 144 HANPSTSKEMALVEYTPPSIRYHNTHPPSQGSSSFTAIGTIEGKFDCGYLVKVKLGSEIL 203
Query: 230 KGVLYHV--PHDSHVSANNTNDTLLP--------RRRNRKRSRRADSDPSRPNPNRSGYN 279
GVLYH P S N+ ++P RR ++R R DP+ P PNRSGYN
Sbjct: 204 NGVLYHSAQPGPSSSPTAVLNNAVVPYVETGRRRRRLGKRRRSRRREDPNYPKPNRSGYN 263
Query: 280 FFFSENYASLKSSHDDGQEKTISTKMGNMWSQLSEAEKQVF-DVWL 324
FFF+E + LKS + + +E+ + +G WS LS E+ V+ D+ L
Sbjct: 264 FFFAEKHCKLKSLYPN-KEREFTKLIGESWSNLSTEERMVYQDIGL 308
>AT1G55650.1 | HMG (high mobility group) box protein with
ARID/BRIGHT DNA-binding domain-containing protein |
Chr1:20796340-20798481 FORWARD LENGTH=337 | 201606
Length = 337
Score = 178 bits (452), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 156/263 (59%), Gaps = 30/263 (11%)
Query: 59 YEQVTQDADLFHKTLKNLHGSLGTKITVPTIGGKALDLYQLFVQVTSRGGLAKVIQNRQW 118
Y+ + ++ +LF + L++ H S K +P +GGK+LDL++LF +VTSRGGL KVI++R+
Sbjct: 30 YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89
Query: 119 KEIIAVFNFPVTITNASFVLRKYYMSLLHHYEQVYFRRENKPFSLTYVGNSPVGASSSLQ 178
KE+I FNF TITN++FVLRK Y+ +L +E +Y+ + P S + + L
Sbjct: 90 KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQ--APLSTFWEKEKAL----KLL 143
Query: 179 TQCATNPENGTNTSDIPANSQICSGSRVSGTIDGKFDYGYLVTVTFGSEKLKGVLYHVPH 238
+ + N + + ++ G+ ++G IDGKF+ GYL++ GSEKLKG+LYH+
Sbjct: 144 IEKSANRDKDSQ--------ELKPGTVITGIIDGKFESGYLISTKVGSEKLKGMLYHISP 195
Query: 239 DSHVSANNTNDTLLPRRRNRKRSRRADSDPSR-PNPNRSGYNFFFSENYASLKSSHDDGQ 297
++ +R +K+++ + D + P R+GYNFF +E +K + + GQ
Sbjct: 196 ET--------------KRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIK-AENAGQ 240
Query: 298 EKTISTKMGNMWSQLSEAEKQVF 320
+ + GNMW+ LSE++++V+
Sbjct: 241 KVSSPKNFGNMWTNLSESDRKVY 263
>AT2G17410.2 | ARID/BRIGHT DNA-binding domain-containing protein |
Chr2:7559869-7563474 FORWARD LENGTH=780 | 201606
Length = 780
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 28 VISSTPLYSDTKPASQRDLGLNESYIAPEATYEQVTQDADLFHKTLKNLHGSLGTKITVP 87
++ + P++ T A +R L+++ E+ E+ D F K L + P
Sbjct: 463 IVRTPPVFDGTMRA-KRSFLLDDASDGNESGTEE---DQSAFMKELDSFFRERNMDFKPP 518
Query: 88 TIGGKALDLYQLFVQVTSRGGLAKVIQNRQWKEIIAVFNFPVTITNASFVLRKYYMSLLH 147
G+ L+ +L+ VT GG KV ++ W+++ F P T T S+ R +Y L
Sbjct: 519 KFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGESFRPPKTCTTVSWTFRGFYEKALL 578
Query: 148 HYEQ 151
YE+
Sbjct: 579 EYER 582