BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0620.1
(148 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27960.1 | ubiquitin conjugating enzyme 9 | Chr4:13916065-139... 278 5e-98
AT1G64230.2 | ubiquitin-conjugating enzyme 28 | Chr1:23833792-23... 278 1e-97
AT1G64230.1 | ubiquitin-conjugating enzyme 28 | Chr1:23833792-23... 278 1e-97
AT4G27960.2 | ubiquitin conjugating enzyme 9 | Chr4:13916065-139... 278 2e-97
AT5G53300.4 | ubiquitin-conjugating enzyme 10 | Chr5:21632802-21... 277 2e-97
>AT4G27960.1 | ubiquitin conjugating enzyme 9 |
Chr4:13916065-13917203 REVERSE LENGTH=148 | 201606
Length = 148
Score = 278 bits (712), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 129/148 (87%), Positives = 137/148 (92%)
Query: 1 MASKRIQKELQDLQRDPPTSCSAGPAGEDLFHWQATIMGPSDSPYSGGVFFVMIHFPPDY 60
MASKRI KEL+DLQ+DPPTSCSAGP ED+FHWQATIMGPSDSPYSGGVF V IHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVNFQTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKV F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHIYKNQRNRYEETARAWTQKYAMN 148
PEIAH+YK +N+YE TAR WTQKYAM
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148
>AT1G64230.2 | ubiquitin-conjugating enzyme 28 |
Chr1:23833792-23835220 FORWARD LENGTH=148 | 201606
Length = 148
Score = 278 bits (710), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 128/148 (86%), Positives = 137/148 (92%)
Query: 1 MASKRIQKELQDLQRDPPTSCSAGPAGEDLFHWQATIMGPSDSPYSGGVFFVMIHFPPDY 60
MASKRI KEL+DLQ+DPPTSCSAGP ED+FHWQATIMGPSDSPYSGGVF V IHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVNFQTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKV F+TKV+HPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHIYKNQRNRYEETARAWTQKYAMN 148
PEIAH+YK R +YE TAR+WTQKYAM
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
>AT1G64230.1 | ubiquitin-conjugating enzyme 28 |
Chr1:23833792-23835220 FORWARD LENGTH=148 | 201606
Length = 148
Score = 278 bits (710), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 128/148 (86%), Positives = 137/148 (92%)
Query: 1 MASKRIQKELQDLQRDPPTSCSAGPAGEDLFHWQATIMGPSDSPYSGGVFFVMIHFPPDY 60
MASKRI KEL+DLQ+DPPTSCSAGP ED+FHWQATIMGPSDSPYSGGVF V IHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVNFQTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKV F+TKV+HPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHIYKNQRNRYEETARAWTQKYAMN 148
PEIAH+YK R +YE TAR+WTQKYAM
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
>AT4G27960.2 | ubiquitin conjugating enzyme 9 |
Chr4:13916065-13917293 REVERSE LENGTH=178 | 201606
Length = 178
Score = 278 bits (711), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 129/148 (87%), Positives = 137/148 (92%)
Query: 1 MASKRIQKELQDLQRDPPTSCSAGPAGEDLFHWQATIMGPSDSPYSGGVFFVMIHFPPDY 60
MASKRI KEL+DLQ+DPPTSCSAGP ED+FHWQATIMGPSDSPYSGGVF V IHFPPDY
Sbjct: 31 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90
Query: 61 PFKPPKVNFQTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKV F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150
Query: 121 PEIAHIYKNQRNRYEETARAWTQKYAMN 148
PEIAH+YK +N+YE TAR WTQKYAM
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178
>AT5G53300.4 | ubiquitin-conjugating enzyme 10 |
Chr5:21632802-21633989 REVERSE LENGTH=148 | 201606
Length = 148
Score = 277 bits (708), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 127/148 (85%), Positives = 138/148 (93%)
Query: 1 MASKRIQKELQDLQRDPPTSCSAGPAGEDLFHWQATIMGPSDSPYSGGVFFVMIHFPPDY 60
MASKRI KEL+DLQ+DPPTSCSAGP ED+FHWQATIMGPS+SPY+GGVF V IHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVNFQTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKV F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHIYKNQRNRYEETARAWTQKYAMN 148
PEIAH+YK +N+YE TAR+WTQKYAM
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148