BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0650.1
(344 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G40290.1 | Eukaryotic translation initiation factor 2 subunit... 571 0.0
AT5G05470.1 | eukaryotic translation initiation factor 2 alpha s... 523 0.0
AT2G40290.3 | Eukaryotic translation initiation factor 2 subunit... 408 e-144
AT2G40290.2 | Eukaryotic translation initiation factor 2 subunit... 408 e-144
>AT2G40290.1 | Eukaryotic translation initiation factor 2 subunit 1
| Chr2:16829030-16830889 REVERSE LENGTH=344 | 201606
Length = 344
Score = 571 bits (1472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 292/345 (84%), Positives = 320/345 (92%), Gaps = 2/345 (0%)
Query: 1 MASNTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60
MAS TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI
Sbjct: 1 MASQTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60
Query: 61 RSVSSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVAEEDIQTCEERYNKSKLVHSIMRHVA 120
RSVSSLIKVGR EPVMVLRVDKEKGYIDLSKRRV+EEDIQTCEERYNKSKLVHSIMRHVA
Sbjct: 61 RSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVA 120
Query: 121 ETLSLDLEDLYIHIGWPLYRKYGHAFEAFKLIVADPDTILDTLTREVKEVGPDGQEVTKV 180
ETLS+DLEDLY++IGWPLYR++GHAFEAFK++V DPD++L LTRE+KEVGPDGQEVTKV
Sbjct: 121 ETLSIDLEDLYVNIGWPLYRRHGHAFEAFKILVTDPDSVLGPLTREIKEVGPDGQEVTKV 180
Query: 181 VPALTPEVKDSLIKNIRRRMTPQPTKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNADCP 240
VPA+T EVKD+L+KNIRRRMTPQP KIRADIE+KCFQFDGV+HIKEAM+ AEAAGN DCP
Sbjct: 181 VPAVTEEVKDALVKNIRRRMTPQPMKIRADIELKCFQFDGVVHIKEAMKNAEAAGNEDCP 240
Query: 241 VKIKLVAPPLYVLTTQTLDKDQGITVLNNAIKACTEAIDSHKGKLVVKEAARAVSERDDK 300
VKIKLVAPPLYVLTTQTLDK+QGI +LN AI ACTE I++HKGKLVVKE ARAVSERD+K
Sbjct: 241 VKIKLVAPPLYVLTTQTLDKEQGIEILNKAIAACTETIETHKGKLVVKEGARAVSERDEK 300
Query: 301 LLAEHMAKLRNDNEEM-SGDEDSEEEEDTGMGEIDLEGGVTGIQE 344
+L EHMAKLR DNEEM ++ +EEEDTGMGE+DL+ G GI E
Sbjct: 301 MLTEHMAKLRLDNEEMSGDEDSGDEEEDTGMGEVDLDAG-AGIIE 344
>AT5G05470.1 | eukaryotic translation initiation factor 2 alpha
subunit | Chr5:1620579-1622214 FORWARD LENGTH=344 |
201606
Length = 344
Score = 523 bits (1347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 269/345 (77%), Positives = 308/345 (89%), Gaps = 2/345 (0%)
Query: 1 MASNTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60
MA+ PNLECRMYE++YP+VDMAVMIQVK IADMGAYVSLLEYNNIEGMILFSELSRRRI
Sbjct: 1 MANPAPNLECRMYESRYPDVDMAVMIQVKTIADMGAYVSLLEYNNIEGMILFSELSRRRI 60
Query: 61 RSVSSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVAEEDIQTCEERYNKSKLVHSIMRHVA 120
RS+SSLIKVGR EPVMVLRVD+E+GYIDLSKRRV++ED + CEERYNKSKLVHSIMRHVA
Sbjct: 61 RSISSLIKVGRTEPVMVLRVDRERGYIDLSKRRVSDEDKEACEERYNKSKLVHSIMRHVA 120
Query: 121 ETLSLDLEDLYIHIGWPLYRKYGHAFEAFKLIVADPDTILDTLTREVKEVGPDGQEVTKV 180
ET+ +DLE+LY++IGWPLY+K+GHAFEAFK++V DPD++ D LTREVKE GPDG EVTKV
Sbjct: 121 ETVGVDLEELYVNIGWPLYKKHGHAFEAFKIVVTDPDSVFDALTREVKETGPDGVEVTKV 180
Query: 181 VPALTPEVKDSLIKNIRRRMTPQPTKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNADCP 240
VPA++ E+KD+ +K+IRRRMTPQP KIRADIE+KCFQFDGVLHIKEAM+KAEA G DCP
Sbjct: 181 VPAVSEELKDAFLKDIRRRMTPQPMKIRADIELKCFQFDGVLHIKEAMKKAEAVGTDDCP 240
Query: 241 VKIKLVAPPLYVLTTQTLDKDQGITVLNNAIKACTEAIDSHKGKLVVKEAARAVSERDDK 300
VKIKLVAPPLYVLTT T K++GI LN AI+AC AI+ HKGKLVVKE ARAVSERDDK
Sbjct: 241 VKIKLVAPPLYVLTTHTHYKEKGIVTLNKAIEACITAIEEHKGKLVVKEGARAVSERDDK 300
Query: 301 LLAEHMAKLRNDNEEM-SGDEDSEEEEDTGMGEIDLEGGVTGIQE 344
LLAEHMAKLR DNEEM + +EEEDTGMGE+D++GG +GI E
Sbjct: 301 LLAEHMAKLRMDNEEMSGDEGSEDEEEDTGMGEVDIDGG-SGIIE 344
>AT2G40290.3 | Eukaryotic translation initiation factor 2 subunit 1
| Chr2:16829872-16830889 REVERSE LENGTH=241 | 201606
Length = 241
Score = 408 bits (1049), Expect = e-144, Method: Compositional matrix adjust.
Identities = 202/225 (89%), Positives = 218/225 (96%)
Query: 1 MASNTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60
MAS TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI
Sbjct: 1 MASQTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60
Query: 61 RSVSSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVAEEDIQTCEERYNKSKLVHSIMRHVA 120
RSVSSLIKVGR EPVMVLRVDKEKGYIDLSKRRV+EEDIQTCEERYNKSKLVHSIMRHVA
Sbjct: 61 RSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVA 120
Query: 121 ETLSLDLEDLYIHIGWPLYRKYGHAFEAFKLIVADPDTILDTLTREVKEVGPDGQEVTKV 180
ETLS+DLEDLY++IGWPLYR++GHAFEAFK++V DPD++L LTRE+KEVGPDGQEVTKV
Sbjct: 121 ETLSIDLEDLYVNIGWPLYRRHGHAFEAFKILVTDPDSVLGPLTREIKEVGPDGQEVTKV 180
Query: 181 VPALTPEVKDSLIKNIRRRMTPQPTKIRADIEMKCFQFDGVLHIK 225
VPA+T EVKD+L+KNIRRRMTPQP KIRADIE+KCFQFDGV+HIK
Sbjct: 181 VPAVTEEVKDALVKNIRRRMTPQPMKIRADIELKCFQFDGVVHIK 225
>AT2G40290.2 | Eukaryotic translation initiation factor 2 subunit 1
| Chr2:16829872-16830889 REVERSE LENGTH=241 | 201606
Length = 241
Score = 408 bits (1049), Expect = e-144, Method: Compositional matrix adjust.
Identities = 202/225 (89%), Positives = 218/225 (96%)
Query: 1 MASNTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60
MAS TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI
Sbjct: 1 MASQTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60
Query: 61 RSVSSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVAEEDIQTCEERYNKSKLVHSIMRHVA 120
RSVSSLIKVGR EPVMVLRVDKEKGYIDLSKRRV+EEDIQTCEERYNKSKLVHSIMRHVA
Sbjct: 61 RSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVA 120
Query: 121 ETLSLDLEDLYIHIGWPLYRKYGHAFEAFKLIVADPDTILDTLTREVKEVGPDGQEVTKV 180
ETLS+DLEDLY++IGWPLYR++GHAFEAFK++V DPD++L LTRE+KEVGPDGQEVTKV
Sbjct: 121 ETLSIDLEDLYVNIGWPLYRRHGHAFEAFKILVTDPDSVLGPLTREIKEVGPDGQEVTKV 180
Query: 181 VPALTPEVKDSLIKNIRRRMTPQPTKIRADIEMKCFQFDGVLHIK 225
VPA+T EVKD+L+KNIRRRMTPQP KIRADIE+KCFQFDGV+HIK
Sbjct: 181 VPAVTEEVKDALVKNIRRRMTPQPMKIRADIELKCFQFDGVVHIK 225