BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0710.1
(87 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35980.1 | hypothetical protein | Chr4:17030816-17031586 REVE... 101 8e-30
>AT4G35980.1 | hypothetical protein | Chr4:17030816-17031586
REVERSE LENGTH=87 | 201606
Length = 87
Score = 101 bits (252), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
Query: 2 EDYEIEEKKQAAADVLFQYSQFAMVCIGERVQPHDLRLHLMKEISGMPTSLKKVPAQATV 61
E+YE++E+KQAAADVLF YS+FAM CIG +P D+RLHLMKEISGMPTSLK +
Sbjct: 3 EEYEVDEQKQAAADVLFSYSKFAMACIGNHTRPTDMRLHLMKEISGMPTSLKGRDSSRAA 62
Query: 62 SPVAVGEPSSSSSGGTR-DRMDSSLGL 87
SP +GE SSSSG R D+ DS L
Sbjct: 63 SPDPLGE--SSSSGTARLDKTDSFRAL 87