BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0720.1
(377 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08950.1 | electron transport SCO1/SenC family protein | Chr3... 375 e-129
AT4G39740.1 | Thioredoxin superfamily protein | Chr4:18435586-18... 171 1e-50
AT5G01350.1 | UvrABC system C protein | Chr5:145865-146911 REVER... 90 4e-22
>AT3G08950.1 | electron transport SCO1/SenC family protein |
Chr3:2727285-2729289 FORWARD LENGTH=334 | 201606
Length = 334
Score = 375 bits (962), Expect = e-129, Method: Compositional matrix adjust.
Identities = 179/273 (65%), Positives = 220/273 (80%), Gaps = 12/273 (4%)
Query: 104 ERCVFNLYNRYLCTSPENPKSK----SPLEAAAEGDEKTSESSSSSSSSSSHESDQNAGK 159
+RC+ L TS + SK P ++E +EK+ S SS S H++++ +GK
Sbjct: 67 QRCL-------LSTSASDTTSKHDSGKPETKSSEKNEKSG-GSESSDGGSDHKNERASGK 118
Query: 160 SVRGAPVSWLSFFLLVLTGAGVLYYYDNEKKRHIEELHTASTAVKEGPSVGKASLGGPFK 219
VRG PVSW+SFFLL TGAG++YYYD +KKRHIE+++ S AVKEGPS GKA++GGPF
Sbjct: 119 DVRGGPVSWMSFFLLFATGAGLVYYYDTQKKRHIEDINKNSIAVKEGPSAGKAAIGGPFS 178
Query: 220 LVNHDGKPVTEKDFLGKWTVIYFGFTHCPDICPDELMKLAAAIDKIKKKAGFEIVPVFIS 279
L+ DGK VTEK+ +GKWT++YFGFTHCPDICPDEL+KLAAAIDKIK+ +G ++VPVFIS
Sbjct: 179 LIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENSGVDVVPVFIS 238
Query: 280 VDPERDTVEQVHDYVKEFHPNLIGLTGTPEEIKKVARAYRVYYMKTEEEGSDYLVDHSIV 339
VDPERDTV+QVH+YVKEFHP LIGLTG+PEEIK VAR+YRVYYMKTEEE SDYLVDHSIV
Sbjct: 239 VDPERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSDYLVDHSIV 298
Query: 340 MYLMDPTMQFVKFFGKNNDVDQLSDGIIKEIKQ 372
MYLM P M FVKF+GKN+DVD L+DG++KEI+Q
Sbjct: 299 MYLMSPEMNFVKFYGKNHDVDSLTDGVVKEIRQ 331
>AT4G39740.1 | Thioredoxin superfamily protein |
Chr4:18435586-18437095 REVERSE LENGTH=276 | 201606
Length = 276
Score = 171 bits (433), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 132/202 (65%), Gaps = 6/202 (2%)
Query: 173 LLVLTG-AGVLYYYDNEKKRHIEELHTASTA---VKEGPSVGKASLGGPFKLVNHDGKPV 228
LL G G L+Y N+++R + +S + +V +GGPF LV+ + K V
Sbjct: 72 LLGFAGFVGFLHY--NDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIV 129
Query: 229 TEKDFLGKWTVIYFGFTHCPDICPDELMKLAAAIDKIKKKAGFEIVPVFISVDPERDTVE 288
TE DF GKW ++YFG++ PD+ P++L ++ A+DK++ K +I+PVF+++DP+RDT
Sbjct: 130 TENDFCGKWVLLYFGYSFSPDVGPEQLKMMSKAVDKLESKHNEKILPVFVTLDPQRDTPS 189
Query: 289 QVHDYVKEFHPNLIGLTGTPEEIKKVARAYRVYYMKTEEEGSDYLVDHSIVMYLMDPTMQ 348
+H Y+KEF ++GLTGT ++++A+ YRVY+ K +E+G DYLVD S MYL++P M+
Sbjct: 190 HLHAYLKEFDSRILGLTGTASAMRQMAQEYRVYFKKVQEDGEDYLVDTSHNMYLINPKME 249
Query: 349 FVKFFGKNNDVDQLSDGIIKEI 370
V+ FG + D+LS ++KE+
Sbjct: 250 IVRCFGVEYNPDELSQELLKEV 271
>AT5G01350.1 | UvrABC system C protein | Chr5:145865-146911
REVERSE LENGTH=72 | 201606
Length = 72
Score = 89.7 bits (221), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 31 IMAGGNFMHRVLSYVVNELVVNGLANSPAFQRFAVRTSRRIEDVSALAAKKRQELAAKAE 90
+ GGNF+ RV+SYV NE +VNGLANS AFQRFAVRTS+RIE++S +AA+ R+++A + E
Sbjct: 1 MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSKMAAENREKVAQQME 60
Query: 91 EMAKNFE 97
E AKN +
Sbjct: 61 EFAKNID 67