BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0730.1
(530 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06790.2 | plastid developmental protein DAG | Chr3:2144564-2... 167 3e-48
AT3G06790.1 | plastid developmental protein DAG | Chr3:2144564-2... 164 4e-47
AT1G53260.1 | hypothetical protein | Chr1:19859393-19860421 REVE... 164 9e-47
AT1G72530.1 | plastid developmental protein DAG | Chr1:27312999-... 157 5e-45
AT1G72530.2 | plastid developmental protein DAG | Chr1:27312999-... 151 1e-42
>AT3G06790.2 | plastid developmental protein DAG |
Chr3:2144564-2145743 REVERSE LENGTH=244 | 201606
Length = 244
Score = 167 bits (424), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 93/117 (79%), Gaps = 3/117 (2%)
Query: 92 SNRPPKETIVLDGCDFEHWLVVMEPPDPNDPNITRDDIIDSYIKTLTQVLGSEEEARKQI 151
SNRPPKETI+LDGCD+EHWL+VME DP T +++I+SY+KTLT VLG EEEA+K+I
Sbjct: 79 SNRPPKETILLDGCDYEHWLIVMEFTDPKP---TEEEMINSYVKTLTSVLGCEEEAKKKI 135
Query: 152 YSVSTRHYFAFGCIVSEELSYKIKELPRVRWVLPDSYLDVRNKSYGGEPFVDGQAVP 208
YSV T Y FG ++SEELS K+K LP V WVLPDSYLDV NK YGG+ +V+G+ +P
Sbjct: 136 YSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIP 192
>AT3G06790.1 | plastid developmental protein DAG |
Chr3:2144564-2145743 REVERSE LENGTH=244 | 201606
Length = 244
Score = 164 bits (416), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 74/117 (63%), Positives = 93/117 (79%), Gaps = 3/117 (2%)
Query: 92 SNRPPKETIVLDGCDFEHWLVVMEPPDPNDPNITRDDIIDSYIKTLTQVLGSEEEARKQI 151
SNRPPKETI+LDGCD+EHWL+VME DP T +++I+SY+KTLT VLG +EEA+K+I
Sbjct: 79 SNRPPKETILLDGCDYEHWLIVMEFTDPKP---TEEEMINSYVKTLTSVLGWQEEAKKKI 135
Query: 152 YSVSTRHYFAFGCIVSEELSYKIKELPRVRWVLPDSYLDVRNKSYGGEPFVDGQAVP 208
YSV T Y FG ++SEELS K+K LP V WVLPDSYLDV NK YGG+ +V+G+ +P
Sbjct: 136 YSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIP 192
>AT1G53260.1 | hypothetical protein | Chr1:19859393-19860421 REVERSE
LENGTH=271 | 201606
Length = 271
Score = 164 bits (416), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 158/281 (56%), Gaps = 45/281 (16%)
Query: 150 QIYSVSTRHYFAFGCIVSEELSYKIKELPRVRWVLPDSYLDVRNKSYGGEPFVDGQAVPY 209
+IYSVS + YFAFG +VSE+LS+KIKELP+V+WVLPDSYLD +NK YGGEPF+DG+AVPY
Sbjct: 2 KIYSVSHKCYFAFGALVSEDLSHKIKELPKVKWVLPDSYLDGKNKDYGGEPFIDGKAVPY 61
Query: 210 DPKYHEEWVRNNARANERSKRTRNDRPRNFDRR-RDNMNSGAMPPPPSSTPNPNFRNQGA 268
DPKYHEEW+RNNA A ++R R R + R R N ++G +R
Sbjct: 62 DPKYHEEWIRNNANATNENRRPRRPRNSDGGRNDRGNQDTG-------------YR---- 104
Query: 269 PNQDMRPPTNQGFQNQVPPANQGFQNQGPPPTNQGFQNQGPPSANQGFQNQGPPPSANQG 328
RPP NQG PP N PP Q PP+ NQ ++ PPP+ NQ
Sbjct: 105 -----RPPPNQGMGGAPPPPPHIGNNPNMPPHIQ------PPNMNQNYRGPPPPPNMNQN 153
Query: 329 FQNQAPPPANQGFQNQSPPYRNQDFANRGPPPPVQNRDFQNRDIPPPMHNQGFQNSYQPP 388
+Q P NQ +Q P Q++ +GPPPP N+ +Q PPP NQ +Q PP
Sbjct: 154 YQGPPAPNMNQNYQGPPPSNMGQNY--QGPPPPNMNQSYQ--GPPPPNMNQSYQG---PP 206
Query: 389 P--QGQGFQNRDVPPPMQNQGFQGRNMAPPPPPPPAAAGNW 427
P GQ ++ +PPP +Q ++G PPPP G W
Sbjct: 207 PSNMGQNYRGPSLPPPNMSQNYEG-------PPPPNMNGGW 240
>AT1G72530.1 | plastid developmental protein DAG |
Chr1:27312999-27313937 FORWARD LENGTH=188 | 201606
Length = 188
Score = 157 bits (397), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 98/128 (76%), Gaps = 3/128 (2%)
Query: 101 VLDGCDFEHWLVVMEPPDPNDPNITRDDIIDSYIKTLTQVLGSEEEARKQIYSVSTRHYF 160
+++GCD++HWLV+M+PP+ TR+ I+ S+++TL LGSEEEA++ IYSVST++Y+
Sbjct: 48 LVEGCDYKHWLVLMKPPNGYP---TRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYY 104
Query: 161 AFGCIVSEELSYKIKELPRVRWVLPDSYLDVRNKSYGGEPFVDGQAVPYDPKYHEEWVRN 220
AFGC + E L+YKI+ LP V+WVLPDS++ + YGGEPFVDG+ VPYD KYH +W+R+
Sbjct: 105 AFGCRIHEPLTYKIRSLPDVKWVLPDSFIVDGDNRYGGEPFVDGEVVPYDEKYHADWLRD 164
Query: 221 NARANERS 228
+ +S
Sbjct: 165 QTDEDAKS 172
>AT1G72530.2 | plastid developmental protein DAG |
Chr1:27312999-27313937 FORWARD LENGTH=192 | 201606
Length = 192
Score = 151 bits (381), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 98/132 (74%), Gaps = 7/132 (5%)
Query: 101 VLDGCDFEHWLVVMEPPDPNDPNITRDDIIDSYIKTLTQVLGSEEEARKQIYSVSTRHYF 160
+++GCD++HWLV+M+PP+ TR+ I+ S+++TL LGSEEEA++ IYSVST++Y+
Sbjct: 48 LVEGCDYKHWLVLMKPPNGYP---TRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYY 104
Query: 161 AFGCIVSEELSYKIKELPRVRWVLPDSYLDVRNKSYG----GEPFVDGQAVPYDPKYHEE 216
AFGC + E L+YKI+ LP V+WVLPDS++ + YG GEPFVDG+ VPYD KYH +
Sbjct: 105 AFGCRIHEPLTYKIRSLPDVKWVLPDSFIVDGDNRYGVFFAGEPFVDGEVVPYDEKYHAD 164
Query: 217 WVRNNARANERS 228
W+R+ + +S
Sbjct: 165 WLRDQTDEDAKS 176