BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0770.1
(118 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE ... 58 2e-11
AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444 REVE... 53 1e-09
AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825 REVE... 48 7e-08
>AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE
LENGTH=161 | 201606
Length = 161
Score = 58.2 bits (139), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 16/83 (19%)
Query: 1 MSSDCISNYAND--DIVTSVTP---TYVNLHKWPESEAEFVRTLNRGSSSSGAGGGGGDV 55
M+S CIS+ ND D V P +YVNL+KWPES+AEFVR++ R GGG
Sbjct: 1 MNSVCISSCINDAHDPRVPVRPVRASYVNLYKWPESDAEFVRSVRR--------GGGLPA 52
Query: 56 PMMNDQMRRSLSRQRYLRSYPFT 78
+ D + RQ YLRSY F+
Sbjct: 53 ARVVDSIS---CRQMYLRSYTFS 72
>AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444
REVERSE LENGTH=141 | 201606
Length = 141
Score = 53.1 bits (126), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 1 MSSDCISNYAN---DDIVTSVTPTYVNLHKWPESEAEFVRTLNRGSSSSGAGGGGGDVPM 57
M+S CI + N D I TY NL+KWP +EAEFVR++N G
Sbjct: 1 MASKCIDDCVNIKRDSICVRPVMTYANLYKWPMAEAEFVRSINH--------DGSQHRTT 52
Query: 58 MNDQMRRSLSRQRYLRSYPFTT 79
+ D + RQ YLRSY F+T
Sbjct: 53 VVDSIS---CRQMYLRSYTFST 71
>AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825
REVERSE LENGTH=124 | 201606
Length = 124
Score = 47.8 bits (112), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 1 MSSDCIS---NYANDDIVTSVTPTYVNLHKWPESEAEFVRTLNRGSSSSGAGGGGGDVPM 57
M+S CI N N+ I T+ +HKWP +E EFV+++++ S P
Sbjct: 1 MASKCIGDCVNIKNNAICVRPGRTHAKIHKWPMAEVEFVQSISQDGS-----------PR 49
Query: 58 MNDQMRRSLSRQRYLRSYPFTTKKE 82
+ RQ YLRSY F+ K+E
Sbjct: 50 RTTAVESLSCRQMYLRSYTFSRKEE 74