BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0780.1
(1449 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 429 e-129
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 429 e-129
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 213 2e-62
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 126 6e-33
AT5G48050.1 | Copia-like polyprotein/retrotransposon | Chr5:1947... 89 4e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 429 bits (1102), Expect = e-129, Method: Compositional matrix adjust.
Identities = 212/504 (42%), Positives = 309/504 (61%), Gaps = 7/504 (1%)
Query: 932 VSASSFDEPTTFSSASKHAHWRKAMEDEMAALMKNQTWSLVPPPSNGNIIDSKWIYKVKQ 991
V + EP+T++ A + W AM+DE+ A+ TW + P N I KW+YK+K
Sbjct: 78 VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137
Query: 992 KADGSIERYKARLVARGYSQQYGVDYGETYSPVVRPATIRTVLSLAVTGNWGIRQLDVKN 1051
+DG+IERYKARLVA+GY+QQ G+D+ ET+SPV + +++ +L+++ N+ + QLD+ N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197
Query: 1052 AFLNGNLHENVYLSQPKGFE----DPSNPNFVCKLHKALYGLKQAPRAWHHRFSSSILKL 1107
AFLNG+L E +Y+ P G+ D PN VC L K++YGLKQA R W +FS +++
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257
Query: 1108 GFKQSISDPSMFYHRASHDLTVLLLYVDDIIVTSSSPGLLKSLINNLKLQFDMSDLGDLS 1167
GF QS SD + F + +L+YVDDII+ S++ + L + LK F + DLG L
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 1168 YFLGMEATRSSEGLTLTQRKYSLDLLRRFGLIDSKPVATPVITGTKLSKNDGETLSDPQM 1227
YFLG+E RS+ G+ + QRKY+LDLL GL+ KP + P+ S + G D +
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377
Query: 1228 YRSIVGALQYLTLTRPDIAYAVNQISKFMSKPTSHHLIAAKRILRYVKGSLDHGLTFRRA 1287
YR ++G L YL +TR DI++AVN++S+F P H A +IL Y+KG++ GL +
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437
Query: 1288 TSQPLIGYSDADWAGSPDDRRSTSGYGIFLGPNLIAWASKTQPTVARSSTEAEYRAVAHA 1347
L +SDA + D RRST+GY +FLG +LI+W SK Q V++SS EAEYRA++ A
Sbjct: 438 AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 497
Query: 1348 TAEIIWVRNLLHELGLPLSDSPIIYCDNLSTTYLAVNPILHSRTKHAAIDFHFVREQ-VK 1406
T E++W+ EL LPLS +++CDN + ++A N + H RTKH D H VRE+ V
Sbjct: 498 TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVY 557
Query: 1407 GGNLRVHFISGEDQLADIFTKGLS 1430
L F + ++Q D FT+ LS
Sbjct: 558 QATLSYSFQAYDEQ--DGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 429 bits (1102), Expect = e-129, Method: Compositional matrix adjust.
Identities = 212/504 (42%), Positives = 309/504 (61%), Gaps = 7/504 (1%)
Query: 932 VSASSFDEPTTFSSASKHAHWRKAMEDEMAALMKNQTWSLVPPPSNGNIIDSKWIYKVKQ 991
V + EP+T++ A + W AM+DE+ A+ TW + P N I KW+YK+K
Sbjct: 78 VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137
Query: 992 KADGSIERYKARLVARGYSQQYGVDYGETYSPVVRPATIRTVLSLAVTGNWGIRQLDVKN 1051
+DG+IERYKARLVA+GY+QQ G+D+ ET+SPV + +++ +L+++ N+ + QLD+ N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197
Query: 1052 AFLNGNLHENVYLSQPKGFE----DPSNPNFVCKLHKALYGLKQAPRAWHHRFSSSILKL 1107
AFLNG+L E +Y+ P G+ D PN VC L K++YGLKQA R W +FS +++
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257
Query: 1108 GFKQSISDPSMFYHRASHDLTVLLLYVDDIIVTSSSPGLLKSLINNLKLQFDMSDLGDLS 1167
GF QS SD + F + +L+YVDDII+ S++ + L + LK F + DLG L
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 1168 YFLGMEATRSSEGLTLTQRKYSLDLLRRFGLIDSKPVATPVITGTKLSKNDGETLSDPQM 1227
YFLG+E RS+ G+ + QRKY+LDLL GL+ KP + P+ S + G D +
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377
Query: 1228 YRSIVGALQYLTLTRPDIAYAVNQISKFMSKPTSHHLIAAKRILRYVKGSLDHGLTFRRA 1287
YR ++G L YL +TR DI++AVN++S+F P H A +IL Y+KG++ GL +
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437
Query: 1288 TSQPLIGYSDADWAGSPDDRRSTSGYGIFLGPNLIAWASKTQPTVARSSTEAEYRAVAHA 1347
L +SDA + D RRST+GY +FLG +LI+W SK Q V++SS EAEYRA++ A
Sbjct: 438 AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 497
Query: 1348 TAEIIWVRNLLHELGLPLSDSPIIYCDNLSTTYLAVNPILHSRTKHAAIDFHFVREQ-VK 1406
T E++W+ EL LPLS +++CDN + ++A N + H RTKH D H VRE+ V
Sbjct: 498 TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVY 557
Query: 1407 GGNLRVHFISGEDQLADIFTKGLS 1430
L F + ++Q D FT+ LS
Sbjct: 558 QATLSYSFQAYDEQ--DGFTEYLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 213 bits (543), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 147/224 (65%), Gaps = 1/224 (0%)
Query: 1130 LLLYVDDIIVTSSSPGLLKSLINNLKLQFDMSDLGDLSYFLGMEATRSSEGLTLTQRKYS 1189
LLLYVDDI++T SS LL LI L F M DLG + YFLG++ GL L+Q KY+
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 1190 LDLLRRFGLIDSKPVATPVITGTKLSKNDGETLSDPQMYRSIVGALQYLTLTRPDIAYAV 1249
+L G++D KP++TP+ S + + DP +RSIVGALQYLTLTRPDI+YAV
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAV 121
Query: 1250 NQISKFMSKPTSHHLIAAKRILRYVKGSLDHGLTFRRATSQPLIGYSDADWAGSPDDRRS 1309
N + + M +PT KR+LRYVKG++ HGL + + + + D+DWAG RRS
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181
Query: 1310 TSGYGIFLGPNLIAWASKTQPTVARSSTEAEYRAVAHATAEIIW 1353
T+G+ FLG N+I+W++K QPTV+RSSTE EYRA+A AE+ W
Sbjct: 182 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase) |
ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 126 bits (316), Expect = 6e-33, Method: Composition-based stats.
Identities = 59/125 (47%), Positives = 87/125 (69%)
Query: 913 MVTRSRDGTRKPKILLSQSVSASSFDEPTTFSSASKHAHWRKAMEDEMAALMKNQTWSLV 972
M+TRS+ G K S +++ + EP + A K W +AM++E+ AL +N+TW LV
Sbjct: 1 MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60
Query: 973 PPPSNGNIIDSKWIYKVKQKADGSIERYKARLVARGYSQQYGVDYGETYSPVVRPATIRT 1032
PPP N NI+ KW++K K +DG+++R KARLVA+G+ Q+ G+ + ETYSPVVR ATIRT
Sbjct: 61 PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120
Query: 1033 VLSLA 1037
+L++A
Sbjct: 121 ILNVA 125
>AT5G48050.1 | Copia-like polyprotein/retrotransposon |
Chr5:19472661-19473770 REVERSE LENGTH=369 | 201606
Length = 369
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 30/272 (11%)
Query: 31 LVSIRLDNTNYLLWKSQLLPILHSQDLFKFIDGS-YPSPPEFLPSLTESSSQPQRNPEYV 89
V++ L+ NY +W+ + S + IDGS P+P +TE
Sbjct: 23 FVTLDLNKLNYDVWRELFETLCLSFGVLGHIDGSSTPTP------MTEKR---------- 66
Query: 90 FWYRIDQMLLSWLNATLTEPILSQVLGL-TTSKEVWDSLERSFSSINSARLMNLKLQLQT 148
W D ++ W+ T+T+ +L ++ + T++++W SLE F AR + + +L+T
Sbjct: 67 -WKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRT 125
Query: 149 LKKGSLSISDYLLRIKSISDSLAAIGHTVADSELVLIVLSGLGPDYETFVTSITTRLSPP 208
LS+ +Y ++KS+SD L + ++D LV+ +L+GL Y+ + I + P
Sbjct: 126 TTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFP 185
Query: 209 SYSELHSLLLTHEFRLEL--------TKPPTVQTPVFFTQSSIQNTRPPQYSVQRGNRGR 260
S++E S+LL E RL T P++ V FT Q P +Y N GR
Sbjct: 186 SFTEARSMLLMEESRLSNKSKSSLSHTNHPSLSN-VLFTVPRQQERYPQEYHNNNSNMGR 244
Query: 261 QSRGGYRGNRNYHSNRGNYRNTSYSVLGPPPS 292
+ NR S+ G Y N + L PP+
Sbjct: 245 GRSK--KKNRGGGSSDGRYNNNNNWRLNQPPT 274