BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0910.1
(740 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 323 6e-97
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 323 6e-97
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 146 2e-39
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 94 6e-22
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 55 4e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 323 bits (829), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 190/485 (39%), Positives = 274/485 (56%), Gaps = 24/485 (4%)
Query: 221 EPVTFKQAITVAERENWLVAMQEEMESLHKNQTWEVVPLPEGKSVIGCKWVYKKKEDSSE 280
EP T+ +A E W AM +E+ ++ TWE+ LP K IGCKWVYK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS-- 139
Query: 281 IKGT--RYKARLVAKGYAQKEGVDYNEIFSPVVKHTFIRVLLSIVAHSDLELEQLDVKTA 338
GT RYKARLVAKGY Q+EG+D+ E FSPV K T ++++L+I A + L QLD+ A
Sbjct: 140 -DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198
Query: 339 FLHGDLEEEIYMAQPEGYKVEGKE----NQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHG 394
FL+GDL+EEIYM P GY + N VC L+KS+YGLKQ+ RQW+ +F ++ G
Sbjct: 199 FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 395 FRRSDYDCCVYIKKLREGDFIYLLLYVDDMLIASRSMVEINKLKSQLSQEFEMKDMGAAK 454
F +S D Y K+ F+ +L+YVDD++I S + +++LKSQL F+++D+G K
Sbjct: 259 FVQSHSD-HTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 455 KILGMEIKRERSSKKLYLNQKGYIERVVSRFGMQNAKAVSTPLAPHFRLSRKQSPTTTVE 514
LG+EI RS+ + + Q+ Y ++ G+ K S P+ P S
Sbjct: 318 YFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG------ 369
Query: 515 KDHMDRIPYASAVGSLMYAMVCTRPDISQAVSVGSRFMANPGKTHWEAVKWVLRYLKGTV 574
D +D Y +G LMY + TR DIS AV+ S+F P H +AV +L Y+KGTV
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 575 DTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYVFNVHGAPVSWRSILQSTVALSTTE 633
GL + Q+ + D+ + D RRST GY + + +SW+S Q V+ S+ E
Sbjct: 429 GQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 634 AEYMAMAEGVKEALWLWGLLDDLGIK-QECVDVWYDSQSAIHLAKNQVHHARTKHIDVRY 692
AEY A++ E +WL +L + + ++ D+ +AIH+A N V H RTKHI+
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 693 HFVRD 697
H VR+
Sbjct: 549 HSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 323 bits (829), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 190/485 (39%), Positives = 274/485 (56%), Gaps = 24/485 (4%)
Query: 221 EPVTFKQAITVAERENWLVAMQEEMESLHKNQTWEVVPLPEGKSVIGCKWVYKKKEDSSE 280
EP T+ +A E W AM +E+ ++ TWE+ LP K IGCKWVYK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS-- 139
Query: 281 IKGT--RYKARLVAKGYAQKEGVDYNEIFSPVVKHTFIRVLLSIVAHSDLELEQLDVKTA 338
GT RYKARLVAKGY Q+EG+D+ E FSPV K T ++++L+I A + L QLD+ A
Sbjct: 140 -DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198
Query: 339 FLHGDLEEEIYMAQPEGYKVEGKE----NQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHG 394
FL+GDL+EEIYM P GY + N VC L+KS+YGLKQ+ RQW+ +F ++ G
Sbjct: 199 FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 395 FRRSDYDCCVYIKKLREGDFIYLLLYVDDMLIASRSMVEINKLKSQLSQEFEMKDMGAAK 454
F +S D Y K+ F+ +L+YVDD++I S + +++LKSQL F+++D+G K
Sbjct: 259 FVQSHSD-HTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 455 KILGMEIKRERSSKKLYLNQKGYIERVVSRFGMQNAKAVSTPLAPHFRLSRKQSPTTTVE 514
LG+EI RS+ + + Q+ Y ++ G+ K S P+ P S
Sbjct: 318 YFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG------ 369
Query: 515 KDHMDRIPYASAVGSLMYAMVCTRPDISQAVSVGSRFMANPGKTHWEAVKWVLRYLKGTV 574
D +D Y +G LMY + TR DIS AV+ S+F P H +AV +L Y+KGTV
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 575 DTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYVFNVHGAPVSWRSILQSTVALSTTE 633
GL + Q+ + D+ + D RRST GY + + +SW+S Q V+ S+ E
Sbjct: 429 GQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 634 AEYMAMAEGVKEALWLWGLLDDLGIK-QECVDVWYDSQSAIHLAKNQVHHARTKHIDVRY 692
AEY A++ E +WL +L + + ++ D+ +AIH+A N V H RTKHI+
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 693 HFVRD 697
H VR+
Sbjct: 549 HSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 146 bits (368), Expect = 2e-39, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 131/235 (55%), Gaps = 11/235 (4%)
Query: 415 IYLLLYVDDMLIASRSMVEINKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQ 474
+YLLLYVDD+L+ S +N L QLS F MKD+G LG++IK S L+L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 475 KGYIERVVSRFGMQNAKAVSTPLAPHFRLSRKQSPTTTVEKDHMDRIPYASAVGSLMYAM 534
Y E++++ GM + K +STPL L S +T D D + S VG+L Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP----LKLNSSVSTAKYPDPSD---FRSIVGALQY-L 110
Query: 535 VCTRPDISQAVSVGSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDS 593
TRPDIS AV++ + M P ++ +K VLRY+KGT+ GL ++ V + DS
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170
Query: 594 DYAGDLDRRRSTTGYVFNVHGAPVSWRSILQSTVALSTTEAEYMAMAEGVKEALW 648
D+AG RRSTTG+ + +SW + Q TV+ S+TE EY A+A E W
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 94.0 bits (232), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 7/123 (5%)
Query: 212 EYALSVEDDEPVTFKQAITVAERENWLVAMQEEMESLHKNQTWEVVPLPEGKSVIGCKWV 271
+Y+L++ K I + W AMQEE+++L +N+TW +VP P ++++GCKWV
Sbjct: 15 KYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWV 74
Query: 272 YKKKEDSSEIKGT--RYKARLVAKGYAQKEGVDYNEIFSPVVKHTFIRVLLSIVAHSDLE 329
+K K S GT R KARLVAKG+ Q+EG+ + E +SPVV+ IR +L++ LE
Sbjct: 75 FKTKLHSD---GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ--LE 129
Query: 330 LEQ 332
+ Q
Sbjct: 130 VGQ 132
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 55.5 bits (132), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 531 MYAMVCTRPDISQAVSVGSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSG 589
MY + TRPD++ AV+ S+F + +AV VL Y+KGTV GL + + Q+
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 590 YVDSDYAGDLDRRRSTTGY 608
+ DSD+A D RRS TG+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78