BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0950.1
(320 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G40010.1 | Ribosomal protein L10 family protein | Chr2:167085... 470 e-168
AT3G09200.1 | Ribosomal protein L10 family protein | Chr3:282336... 463 e-165
AT3G11250.1 | Ribosomal protein L10 family protein | Chr3:352145... 461 e-164
AT3G09200.2 | Ribosomal protein L10 family protein | Chr3:282336... 388 e-136
AT1G25260.1 | Ribosomal protein L10 family protein | Chr1:885416... 56 9e-09
>AT2G40010.1 | Ribosomal protein L10 family protein |
Chr2:16708578-16710448 REVERSE LENGTH=317 | 201606
Length = 317
Score = 470 bits (1209), Expect = e-168, Method: Compositional matrix adjust.
Identities = 234/285 (82%), Positives = 259/285 (90%), Gaps = 2/285 (0%)
Query: 12 AGKKIVYDKKLCTLLDEYTQILVVEADNVGSNQLQTIRKGLRGDSVVLMGKNTMIKRSVR 71
A KKIVYD KLC LL+EY+QILVV ADNVGS QLQ IRKGLRGDSVVLMGKNTM+KRSVR
Sbjct: 8 AEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVR 67
Query: 72 LHAEKTGNKAFLNLIQLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 131
+HA+KTGN+AFL+L+ LL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV
Sbjct: 68 IHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQ 127
Query: 132 PGNTGLDPSQTSFFQVLNIPTKINKGSVEISAPVELIKKGDKVGSSEATLLAKLGIRPFS 191
PGNTGLDPSQTSFFQVLNIPTKINKG+VEI PVELIKKGDKVGSSEA LLAKLGIRPFS
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFS 187
Query: 192 YGLVVVSVFDNGSVYNREVLDLTEEDLMGKFAAGVSMVTSLSLAISYPTLAAAPHMFINT 251
YGLVV SV+DNGSV+N EVL+LTE+DL+ KFAAGVSM+T+LSLAISYPT+AAAPHMF+N
Sbjct: 188 YGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNA 247
Query: 252 YKKVLSVAVATDYSFPKADKVKEYLKDPSKF--VVAAPVVAASAA 294
YK VL+VA+AT+YSFP+A+ VKE+LKDP+KF VAAPV S
Sbjct: 248 YKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGG 292
>AT3G09200.1 | Ribosomal protein L10 family protein |
Chr3:2823364-2825020 REVERSE LENGTH=320 | 201606
Length = 320
Score = 463 bits (1191), Expect = e-165, Method: Compositional matrix adjust.
Identities = 226/271 (83%), Positives = 248/271 (91%)
Query: 12 AGKKIVYDKKLCTLLDEYTQILVVEADNVGSNQLQTIRKGLRGDSVVLMGKNTMIKRSVR 71
A KKI YD KLC L+DEYTQILVV ADNVGS QLQ IRKGLRGDSVVLMGKNTM+KRSVR
Sbjct: 7 AEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVR 66
Query: 72 LHAEKTGNKAFLNLIQLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 131
+H+E TGN A LNL+ LL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV
Sbjct: 67 IHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQ 126
Query: 132 PGNTGLDPSQTSFFQVLNIPTKINKGSVEISAPVELIKKGDKVGSSEATLLAKLGIRPFS 191
PGNTGLDPSQTSFFQVLNIPTKINKG+VEI PVELIK+GDKVGSSEA LLAKLGIRPFS
Sbjct: 127 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 186
Query: 192 YGLVVVSVFDNGSVYNREVLDLTEEDLMGKFAAGVSMVTSLSLAISYPTLAAAPHMFINT 251
YGLVV SV+DNGSV++ EVLDLTE+ L+ KFA+G+SMVTSL+LA+SYPTLAAAPHMFIN
Sbjct: 187 YGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINA 246
Query: 252 YKKVLSVAVATDYSFPKADKVKEYLKDPSKF 282
YK L++AVAT+Y+FP+A+KVKEYLKDPSKF
Sbjct: 247 YKNALAIAVATEYTFPQAEKVKEYLKDPSKF 277
>AT3G11250.1 | Ribosomal protein L10 family protein |
Chr3:3521453-3522826 FORWARD LENGTH=323 | 201606
Length = 323
Score = 461 bits (1187), Expect = e-164, Method: Compositional matrix adjust.
Identities = 225/271 (83%), Positives = 248/271 (91%)
Query: 12 AGKKIVYDKKLCTLLDEYTQILVVEADNVGSNQLQTIRKGLRGDSVVLMGKNTMIKRSVR 71
A KKI YD KLC L+DEYTQILVV ADNVGS QLQ IRKGLRGDSVVLMGKNTM+KRSVR
Sbjct: 7 AEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVR 66
Query: 72 LHAEKTGNKAFLNLIQLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 131
+H+E +GN A LNL+ LL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV
Sbjct: 67 IHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQ 126
Query: 132 PGNTGLDPSQTSFFQVLNIPTKINKGSVEISAPVELIKKGDKVGSSEATLLAKLGIRPFS 191
PGNTGLDPSQTSFFQVLNIPTKINKG+VEI PVELIK+GDKVGSSEA LLAKLGIRPFS
Sbjct: 127 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 186
Query: 192 YGLVVVSVFDNGSVYNREVLDLTEEDLMGKFAAGVSMVTSLSLAISYPTLAAAPHMFINT 251
YGLVV SV+DNGSV++ EVLDLTE+ L+ KFA+G+SMVTSL+LA+SYPTLAAAPHMFIN
Sbjct: 187 YGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINA 246
Query: 252 YKKVLSVAVATDYSFPKADKVKEYLKDPSKF 282
YK L++AVATDY+FP+A+KVKE+LKDPSKF
Sbjct: 247 YKNALAIAVATDYTFPQAEKVKEFLKDPSKF 277
>AT3G09200.2 | Ribosomal protein L10 family protein |
Chr3:2823364-2825020 REVERSE LENGTH=287 | 201606
Length = 287
Score = 388 bits (996), Expect = e-136, Method: Compositional matrix adjust.
Identities = 197/271 (72%), Positives = 218/271 (80%), Gaps = 33/271 (12%)
Query: 12 AGKKIVYDKKLCTLLDEYTQILVVEADNVGSNQLQTIRKGLRGDSVVLMGKNTMIKRSVR 71
A KKI YD KLC L+DEYTQILV RSVR
Sbjct: 7 AEKKIAYDTKLCQLIDEYTQILV---------------------------------RSVR 33
Query: 72 LHAEKTGNKAFLNLIQLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 131
+H+E TGN A LNL+ LL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV
Sbjct: 34 IHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQ 93
Query: 132 PGNTGLDPSQTSFFQVLNIPTKINKGSVEISAPVELIKKGDKVGSSEATLLAKLGIRPFS 191
PGNTGLDPSQTSFFQVLNIPTKINKG+VEI PVELIK+GDKVGSSEA LLAKLGIRPFS
Sbjct: 94 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 153
Query: 192 YGLVVVSVFDNGSVYNREVLDLTEEDLMGKFAAGVSMVTSLSLAISYPTLAAAPHMFINT 251
YGLVV SV+DNGSV++ EVLDLTE+ L+ KFA+G+SMVTSL+LA+SYPTLAAAPHMFIN
Sbjct: 154 YGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINA 213
Query: 252 YKKVLSVAVATDYSFPKADKVKEYLKDPSKF 282
YK L++AVAT+Y+FP+A+KVKEYLKDPSKF
Sbjct: 214 YKNALAIAVATEYTFPQAEKVKEYLKDPSKF 244
>AT1G25260.1 | Ribosomal protein L10 family protein |
Chr1:8854163-8855766 REVERSE LENGTH=235 | 201606
Length = 235
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 107/230 (46%), Gaps = 20/230 (8%)
Query: 5 NKRTKPVA---GKKIVYDKKLCTL------LDEYTQILVVEADNVGSNQLQTIRKGLRGD 55
+KR +PV KK + K C + +++Y+ + V +N+ + + + R+ R +
Sbjct: 4 SKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQFRHN 63
Query: 56 SVVLMGKNTMIKRSVRLHAEKTGNKAFLNLIQLLVGNVGLIFTKGDLKEVSEEVAKYKVG 115
+G N +++ ++ AE + +LL G+ GL+ T +EV Y+
Sbjct: 64 GKFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAYEDS 123
Query: 116 APARVGLVAPIDVVVPPG-----NTGLDPSQTSFFQVLNIPTKINKGSVEISAPVELIKK 170
+R G +A V + G ++P + L +P ++NKG+VE+ A + ++
Sbjct: 124 DFSRTGSIAVETVELKEGPLEQFTHEMEP----LLRKLEMPVRLNKGTVELVADFVVCEE 179
Query: 171 GDKVGSSEATLLAKLGIRPFSYGLVVVSVF--DNGSVYNREVLDLTEEDL 218
G ++ A +L L ++ ++ L ++ + + +Y ++ +L EDL
Sbjct: 180 GKQLSPKSAHILRLLRMKMATFKLNLLCRWSPSDFELYREDLSELYREDL 229