BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1030.1
(285 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39990.1 | eukaryotic translation initiation factor 2 | Chr2:... 413 e-146
AT3G11270.2 | Mov34/MPN/PAD-1 family protein | Chr3:3528989-3531... 114 1e-29
AT3G11270.1 | Mov34/MPN/PAD-1 family protein | Chr3:3528989-3531... 113 4e-29
AT5G05780.2 | RP non-ATPase subunit 8A | Chr5:1735862-1738176 FO... 106 9e-27
AT5G05780.1 | RP non-ATPase subunit 8A | Chr5:1735862-1738176 FO... 106 9e-27
>AT2G39990.1 | eukaryotic translation initiation factor 2 |
Chr2:16698332-16699929 REVERSE LENGTH=293 | 201606
Length = 293
Score = 413 bits (1061), Expect = e-146, Method: Compositional matrix adjust.
Identities = 209/288 (72%), Positives = 249/288 (86%), Gaps = 7/288 (2%)
Query: 5 DQTVLQFF-PLSTS------LSTKVPPVVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT 57
+ T+LQF P ST+ L+ ++ P+VIFN+CDC+VRRPD AERVIGTLLGS+LPDGT
Sbjct: 6 EHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILPDGT 65
Query: 58 VEIRNSYAVPHNESSDQVALDIEYHHNMLLSHQKVNPKEVIVGWYSTGFGVSGGSALIHE 117
V+IRNSYAVPHNESSDQVA+DI+YHHNML SH KVN KE IVGWYSTG GV+GGS+LIH+
Sbjct: 66 VDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHD 125
Query: 118 FYSREVQNPVHLTVDTGFKNGEASIKAFVSINLTLGDRQLAAQFQEIPLDLRMLEAERVG 177
FY+REV NP+HLTVDTGF NGE +IKAFVS NL+LGDRQL A FQEIP+DLRM++AERVG
Sbjct: 126 FYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAERVG 185
Query: 178 FDILKSTMVNKLPNNLEGMQASMERLLALIDDVSKYVDDVVEQRVAPDNNVGKSILDTVA 237
FD+LK+T V+KLPN+LEGM+ +MERLL LI+DV KYVD VV ++APDNN+G+ I D VA
Sbjct: 186 FDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVA 245
Query: 238 SIPKISPGGFDKLINDSIQDNLLLLYLSSLTRTQLSLAEKLNTAAQIL 285
S+PK+ P FD L+NDS+QD LLLLYLSS+TRTQLSLAEKLNTAAQ+L
Sbjct: 246 SLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQML 293
>AT3G11270.2 | Mov34/MPN/PAD-1 family protein | Chr3:3528989-3531317
FORWARD LENGTH=307 | 201606
Length = 307
Score = 114 bits (285), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 137/268 (51%), Gaps = 14/268 (5%)
Query: 22 VPPVVIFNICDCYVR-RPDQAERVIGTLLGSVLPDGTVEIRNSYAVPHNESSDQVA---L 77
V P+V+ +I D Y R D ++RV+G LLGS GTV++ NSYAVP E + L
Sbjct: 19 VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSS-SRGTVDVTNSYAVPFEEDDKDTSIWFL 77
Query: 78 DIEYHHNMLLSHQKVNPKEVIVGWYSTGFGVSGGSALIHEFYSREVQNPVHLTVDTGFKN 137
D YH +M +++N KE IVGWYSTG + +H ++ V NPV + +D K
Sbjct: 78 DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 137
Query: 138 GEASIKAFVSI--NLTLGDRQLAAQFQEIPLDLRMLEAERVGFDIL----KSTMVNKLPN 191
KA+ ++ N T +Q+ F +P ++ E E +G + L K T ++ L
Sbjct: 138 LGIPTKAYYAVEENATQKSQQV---FVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 194
Query: 192 NLEGMQASMERLLALIDDVSKYVDDVVEQRVAPDNNVGKSILDTVASIPKISPGGFDKLI 251
+ +++ L A + ++ Y+D V+E ++ ++ + + D +P ++ K
Sbjct: 195 EVTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 254
Query: 252 NDSIQDNLLLLYLSSLTRTQLSLAEKLN 279
D +L++YLSSL R+ ++L +N
Sbjct: 255 AVKTNDMMLVIYLSSLIRSVIALHSLIN 282
>AT3G11270.1 | Mov34/MPN/PAD-1 family protein | Chr3:3528989-3531317
FORWARD LENGTH=310 | 201606
Length = 310
Score = 113 bits (282), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 137/271 (50%), Gaps = 17/271 (6%)
Query: 22 VPPVVIFNICDCYVR-RPDQAERVIGTLLGSVLPDGTVEIRNSYAVPHNESSDQVA---L 77
V P+V+ +I D Y R D ++RV+G LLGS GTV++ NSYAVP E + L
Sbjct: 19 VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSS-SRGTVDVTNSYAVPFEEDDKDTSIWFL 77
Query: 78 DIEYHHNMLLSHQKVNPKEVIVGWYSTGFGVSGGSALIHEFYSREVQNPVHLTVDTGFKN 137
D YH +M +++N KE IVGWYSTG + +H ++ V NPV + +D K
Sbjct: 78 DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 137
Query: 138 GEASIKAFVSI-----NLTLGDRQLAAQFQEIPLDLRMLEAERVGFDIL----KSTMVNK 188
KA+ ++ N T +Q+ F +P ++ E E +G + L K T ++
Sbjct: 138 LGIPTKAYYAVEEVKENATQKSQQV---FVHVPTEIAAHEVEEIGVEHLLRDVKDTTIST 194
Query: 189 LPNNLEGMQASMERLLALIDDVSKYVDDVVEQRVAPDNNVGKSILDTVASIPKISPGGFD 248
L + +++ L A + ++ Y+D V+E ++ ++ + + D +P ++
Sbjct: 195 LATEVTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELV 254
Query: 249 KLINDSIQDNLLLLYLSSLTRTQLSLAEKLN 279
K D +L++YLSSL R+ ++L +N
Sbjct: 255 KAFAVKTNDMMLVIYLSSLIRSVIALHSLIN 285
>AT5G05780.2 | RP non-ATPase subunit 8A | Chr5:1735862-1738176
FORWARD LENGTH=305 | 201606
Length = 305
Score = 106 bits (265), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 14/268 (5%)
Query: 22 VPPVVIFNICDCYVR-RPDQAERVIGTLLGSVLPDGTVEIRNSYAVPHNESSDQVA---L 77
V P+V+ +I D Y R D ++RV+G LLGS G V++ NSYAVP E + L
Sbjct: 19 VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSS-SRGVVDVTNSYAVPFEEDDKDPSIWFL 77
Query: 78 DIEYHHNMLLSHQKVNPKEVIVGWYSTGFGVSGGSALIHEFYSREVQNPVHLTVDTGFKN 137
D YH +M +++N KE +VGWYSTG + +H ++ V NPV + +D K
Sbjct: 78 DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 137
Query: 138 GEASIKAFVSI--NLTLGDRQLAAQFQEIPLDLRMLEAERVGFDIL----KSTMVNKLPN 191
KA+ ++ N T +++ F + ++ E E +G + L K T ++ L
Sbjct: 138 LGIPTKAYYAVEENATQKSQKV---FVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 194
Query: 192 NLEGMQASMERLLALIDDVSKYVDDVVEQRVAPDNNVGKSILDTVASIPKISPGGFDKLI 251
+ +++ L A + ++ Y+D V+E ++ ++ + + D +P ++ K
Sbjct: 195 EVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 254
Query: 252 NDSIQDNLLLLYLSSLTRTQLSLAEKLN 279
+ D +L++YLSSL R+ ++L +N
Sbjct: 255 SVKTNDMMLVIYLSSLIRSVIALHNLIN 282
>AT5G05780.1 | RP non-ATPase subunit 8A | Chr5:1735862-1738176
FORWARD LENGTH=308 | 201606
Length = 308
Score = 106 bits (265), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 11/268 (4%)
Query: 22 VPPVVIFNICDCYVR-RPDQAERVIGTLLGSVLPDGTVEIRNSYAVPHNESSDQVA---L 77
V P+V+ +I D Y R D ++RV+G LLGS G V++ NSYAVP E + L
Sbjct: 19 VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSS-SRGVVDVTNSYAVPFEEDDKDPSIWFL 77
Query: 78 DIEYHHNMLLSHQKVNPKEVIVGWYSTGFGVSGGSALIHEFYSREVQNPVHLTVDTGFKN 137
D YH +M +++N KE +VGWYSTG + +H ++ V NPV + +D K
Sbjct: 78 DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 137
Query: 138 GEASIKAFVSINLTLGDRQLAAQ--FQEIPLDLRMLEAERVGFDIL----KSTMVNKLPN 191
KA+ ++ + +Q F + ++ E E +G + L K T ++ L
Sbjct: 138 LGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 197
Query: 192 NLEGMQASMERLLALIDDVSKYVDDVVEQRVAPDNNVGKSILDTVASIPKISPGGFDKLI 251
+ +++ L A + ++ Y+D V+E ++ ++ + + D +P ++ K
Sbjct: 198 EVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 257
Query: 252 NDSIQDNLLLLYLSSLTRTQLSLAEKLN 279
+ D +L++YLSSL R+ ++L +N
Sbjct: 258 SVKTNDMMLVIYLSSLIRSVIALHNLIN 285