BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1070.1
(146 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G52560.1 | ubiquitin E2 variant 1D-4 | Chr3:19494678-19495954... 293 e-103
AT3G52560.2 | ubiquitin E2 variant 1D-4 | Chr3:19494678-19495954... 288 e-102
AT3G52560.4 | ubiquitin E2 variant 1D-4 | Chr3:19494678-19495954... 283 2e-99
AT2G36060.1 | MMS ZWEI homologue 3 | Chr2:15143012-15143998 REVE... 276 4e-97
AT2G36060.2 | MMS ZWEI homologue 3 | Chr2:15143012-15143998 REVE... 271 3e-95
>AT3G52560.1 | ubiquitin E2 variant 1D-4 | Chr3:19494678-19495954
REVERSE LENGTH=146 | 201606
Length = 146
Score = 293 bits (749), Expect = e-103, Method: Compositional matrix adjust.
Identities = 136/146 (93%), Positives = 142/146 (97%)
Query: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDTYMRSWTGTIIGPHNSV 60
MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDD YMRSWTGTIIGPHN+V
Sbjct: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
Query: 61 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMACVNHETGVVEPKKFGMLANWQRDYTMED 120
HEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMACVNHETGVV+PKKFG+LANWQR+YTMED
Sbjct: 61 HEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMED 120
Query: 121 ILVQLKKEMSAPQNRKLVQPPEGTCF 146
ILVQLKKEMS NRKLVQPPEGTCF
Sbjct: 121 ILVQLKKEMSTSHNRKLVQPPEGTCF 146
>AT3G52560.2 | ubiquitin E2 variant 1D-4 | Chr3:19494678-19495954
REVERSE LENGTH=147 | 201606
Length = 147
Score = 288 bits (737), Expect = e-102, Method: Compositional matrix adjust.
Identities = 136/147 (92%), Positives = 142/147 (96%), Gaps = 1/147 (0%)
Query: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDTYMRSWTGTIIGPHN-S 59
MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDD YMRSWTGTIIGPHN +
Sbjct: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVT 60
Query: 60 VHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMACVNHETGVVEPKKFGMLANWQRDYTME 119
VHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMACVNHETGVV+PKKFG+LANWQR+YTME
Sbjct: 61 VHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTME 120
Query: 120 DILVQLKKEMSAPQNRKLVQPPEGTCF 146
DILVQLKKEMS NRKLVQPPEGTCF
Sbjct: 121 DILVQLKKEMSTSHNRKLVQPPEGTCF 147
>AT3G52560.4 | ubiquitin E2 variant 1D-4 | Chr3:19494678-19495954
REVERSE LENGTH=164 | 201606
Length = 164
Score = 283 bits (723), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 136/164 (82%), Positives = 142/164 (86%), Gaps = 18/164 (10%)
Query: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDTYMRSWTGTIIGPHN-- 58
MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDD YMRSWTGTIIGPHN
Sbjct: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNIM 60
Query: 59 ----------------SVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMACVNHETGVVE 102
+VHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMACVNHETGVV+
Sbjct: 61 PLLLLLVVTEINFMSQTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVD 120
Query: 103 PKKFGMLANWQRDYTMEDILVQLKKEMSAPQNRKLVQPPEGTCF 146
PKKFG+LANWQR+YTMEDILVQLKKEMS NRKLVQPPEGTCF
Sbjct: 121 PKKFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 164
>AT2G36060.1 | MMS ZWEI homologue 3 | Chr2:15143012-15143998 REVERSE
LENGTH=145 | 201606
Length = 145
Score = 276 bits (705), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 131/146 (89%), Positives = 137/146 (93%), Gaps = 1/146 (0%)
Query: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDTYMRSWTGTIIGPHNSV 60
MTLGSG SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDD YMRSWTGTIIGPHN+V
Sbjct: 1 MTLGSG-SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 59
Query: 61 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMACVNHETGVVEPKKFGMLANWQRDYTMED 120
HEGRIYQLKLFCDKDYPEKPP+VRFHSRINM CVNH+TGVV+ KKFG+LANWQR YTMED
Sbjct: 60 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMED 119
Query: 121 ILVQLKKEMSAPQNRKLVQPPEGTCF 146
IL QLKKEM+A NRKLVQPPEGT F
Sbjct: 120 ILTQLKKEMAASHNRKLVQPPEGTFF 145
>AT2G36060.2 | MMS ZWEI homologue 3 | Chr2:15143012-15143998 REVERSE
LENGTH=146 | 201606
Length = 146
Score = 271 bits (693), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 131/147 (89%), Positives = 137/147 (93%), Gaps = 2/147 (1%)
Query: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDTYMRSWTGTIIGPHN-S 59
MTLGSG SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDD YMRSWTGTIIGPHN +
Sbjct: 1 MTLGSG-SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVT 59
Query: 60 VHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMACVNHETGVVEPKKFGMLANWQRDYTME 119
VHEGRIYQLKLFCDKDYPEKPP+VRFHSRINM CVNH+TGVV+ KKFG+LANWQR YTME
Sbjct: 60 VHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTME 119
Query: 120 DILVQLKKEMSAPQNRKLVQPPEGTCF 146
DIL QLKKEM+A NRKLVQPPEGT F
Sbjct: 120 DILTQLKKEMAASHNRKLVQPPEGTFF 146