BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1080.1
(131 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06270.2 | hypothetical protein | Chr5:1912895-1913263 FORWAR... 99 2e-27
AT5G06270.1 | hypothetical protein | Chr5:1912895-1913263 FORWAR... 99 2e-27
AT3G11600.1 | E3 ubiquitin-protein ligase | Chr3:3667337-3667690... 97 9e-27
AT5G22270.1 | hypothetical protein | Chr5:7372487-7372768 REVERS... 57 2e-11
AT3G52561.1 | hypothetical protein | Chr3:19497188-19497487 REVE... 50 1e-08
>AT5G06270.2 | hypothetical protein | Chr5:1912895-1913263 FORWARD
LENGTH=122 | 201606
Length = 122
Score = 98.6 bits (244), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 18/117 (15%)
Query: 5 RKNPKLDLKLNLSQPRVYDNNNNYNYNYNNNPGIVLSSPSNSSGNSSPISIPSSCVSSEN 64
R++PKL+LKLNLS P ++ ++ SPS S+ S +S SS
Sbjct: 3 RRSPKLELKLNLSPP-------------TSSQRRMVRSPSRSATTSP-----TSPPSSCV 44
Query: 65 NNNNNSTDEILRYSSSPEATSMVLVGCSRCLMYVMLSEEDPKCPKCKSTVLLDFLHD 121
++ N + +RYS+SPE TSMVLVGC RCLMYVMLSE+DPKCPKCKSTVLLDFLH+
Sbjct: 45 SSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHE 101
>AT5G06270.1 | hypothetical protein | Chr5:1912895-1913263 FORWARD
LENGTH=122 | 201606
Length = 122
Score = 98.6 bits (244), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 18/117 (15%)
Query: 5 RKNPKLDLKLNLSQPRVYDNNNNYNYNYNNNPGIVLSSPSNSSGNSSPISIPSSCVSSEN 64
R++PKL+LKLNLS P ++ ++ SPS S+ S +S SS
Sbjct: 3 RRSPKLELKLNLSPP-------------TSSQRRMVRSPSRSATTSP-----TSPPSSCV 44
Query: 65 NNNNNSTDEILRYSSSPEATSMVLVGCSRCLMYVMLSEEDPKCPKCKSTVLLDFLHD 121
++ N + +RYS+SPE TSMVLVGC RCLMYVMLSE+DPKCPKCKSTVLLDFLH+
Sbjct: 45 SSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHE 101
>AT3G11600.1 | E3 ubiquitin-protein ligase | Chr3:3667337-3667690
FORWARD LENGTH=117 | 201606
Length = 117
Score = 96.7 bits (239), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 74/122 (60%), Gaps = 28/122 (22%)
Query: 1 MSRQRKN-PKLDLKLNLSQPRVYDNNNNYNYNYNNNPGIVLSSPSNSSGNSSPISIPSSC 59
MSR+ KN PKL+L+LNLS P + + ++ SP+ S+ S PSSC
Sbjct: 1 MSRRNKNGPKLELRLNLSPPPSQASQMS-----------LVRSPNRSNTTS-----PSSC 44
Query: 60 VSSENNNNNNSTDEILRYSSSPEATSMVLVGCSRCLMYVMLSEEDPKCPKCKSTVLLDFL 119
VSSE N N T TSMVLVGC RCLMYVMLS++DPKCPKCKSTVLLDFL
Sbjct: 45 VSSETNQEENET-----------ITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFL 93
Query: 120 HD 121
+
Sbjct: 94 QE 95
>AT5G22270.1 | hypothetical protein | Chr5:7372487-7372768 REVERSE
LENGTH=93 | 201606
Length = 93
Score = 57.0 bits (136), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 85 SMVLVGCSRCLMYVMLS-EEDPKCPKCKSTVLLDFLHDNTTKKT 127
SMV+VGC C+MY++ S E DP+CP+C S VLLDFL N +KK+
Sbjct: 48 SMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKS 91
>AT3G52561.1 | hypothetical protein | Chr3:19497188-19497487 REVERSE
LENGTH=99 | 201606
Length = 99
Score = 49.7 bits (117), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 77 YSSSPEATSMVLVGCSRCLMYVMLSEEDPKCPKCKSTVLLDF 118
+ EA MV++GC C+MYVM+ +E +CPKCK T L+ F
Sbjct: 58 WVDEEEAPEMVVMGCRSCMMYVMVLQERQRCPKCKCTDLIFF 99