BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1090.1
(224 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G15040.1 | senescence regulator (Protein of unknown function%... 109 5e-29
AT4G21970.1 | senescence regulator (Protein of unknown function%... 80 1e-18
AT4G04630.1 | senescence regulator (Protein of unknown function%... 72 9e-16
AT3G45210.1 | transcription initiation factor TFIID subunit (Pro... 66 2e-13
AT4G26950.2 | senescence regulator (Protein of unknown function%... 65 2e-13
>AT3G15040.1 | senescence regulator (Protein of unknown function%2C
DUF584) | Chr3:5065445-5066176 REVERSE LENGTH=243 |
201606
Length = 243
Score = 109 bits (272), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 120/229 (52%), Gaps = 46/229 (20%)
Query: 39 LSSGLDDELDEDDVFWTGDFTQSNKRSDHHQSSSESKRDNQPL-------GFRRPERFGI 91
+S D EL+EDD+F D + + ++ H SS +K+ G + E GI
Sbjct: 18 ISDSADGELNEDDIFAI-DISHAPPQARHSPVSSPAKQQTPARQLQRSKSGLKNVEASGI 76
Query: 92 LAALSDDSKKETLIAAPFNSSSS-----------------------------RMIPSIPK 122
LAAL + S + ++ F+ + R IP+ PK
Sbjct: 77 LAALPESSGSSSYLSHVFHHKPAAALSTSVSSTASSSSSSGGGASAGSSSSARAIPTAPK 136
Query: 123 PKSPRERDYF-LSLPSGKIHHQSAPVNVPVLSNAA------KMKKSRVYEEDDVDEEDEM 175
P P+ER F S G + QSAPV VP++S+A + K + V ++D+ +EE EM
Sbjct: 137 P--PQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKLTDVVDDDEEEEEGEM 194
Query: 176 LPPHEIVARGSGRSPKTTFSVLEGVGRTLKGRDLRQVRNAVFRQTGFLD 224
LPPHEIVAR +S + SVLEG GRTLKGRDLRQVRNAVFR+TGF+D
Sbjct: 195 LPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFID 243
>AT4G21970.1 | senescence regulator (Protein of unknown function%2C
DUF584) | Chr4:11653633-11654106 FORWARD LENGTH=157 |
201606
Length = 157
Score = 80.1 bits (196), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 137 SGKIHHQSAPVNVPVLSNAAKMKKSRV------YEEDDVDEEDEMLPPHEIVARGSGRSP 190
SG SAP+N+P S K + DD D+E M+PPHE+VA+ R+
Sbjct: 53 SGGAKQSSAPMNIPDWSKVYGYSKKNTSSHLHSWAIDD-DDEGSMVPPHELVAKRLARTQ 111
Query: 191 KTTFSVLEGVGRTLKGRDLRQVRNAVFRQTGFLD 224
++FS+ EG+GRTLKGRDL + RNAV +TGFL+
Sbjct: 112 ISSFSMCEGIGRTLKGRDLSKTRNAVLTRTGFLE 145
>AT4G04630.1 | senescence regulator (Protein of unknown function%2C
DUF584) | Chr4:2332163-2332669 REVERSE LENGTH=168 |
201606
Length = 168
Score = 72.4 bits (176), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 9/94 (9%)
Query: 140 IHHQSAPVNVPVLSNAAKMKKS---------RVYEEDDVDEEDEMLPPHEIVARGSGRSP 190
+ SAP+NVP S KS ++DD D++ M+PPHE VAR R+
Sbjct: 75 VKQSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQ 134
Query: 191 KTTFSVLEGVGRTLKGRDLRQVRNAVFRQTGFLD 224
++FS+ EGVGRTLKGRDL +VRNAV +TGFL+
Sbjct: 135 ISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168
>AT3G45210.1 | transcription initiation factor TFIID subunit
(Protein of unknown function%2C DUF584) |
Chr3:16557482-16557928 REVERSE LENGTH=148 | 201606
Length = 148
Score = 65.9 bits (159), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 9/81 (11%)
Query: 146 PVNVPVLSNAAKM--KKSRVYEEDDVDEEDEMLPPHEIVARGSGRSPKTTFSVLEGVGRT 203
P+NV N +K+ K++R E+D D + LPPHE +A+ + +FSV EG+GRT
Sbjct: 75 PMNV---QNWSKILGKENRKSIENDDDGGEGKLPPHEYLAK----TRMASFSVHEGIGRT 127
Query: 204 LKGRDLRQVRNAVFRQTGFLD 224
LKGRD+ +VRNA+ +TGFLD
Sbjct: 128 LKGRDMSRVRNAILEKTGFLD 148
>AT4G26950.2 | senescence regulator (Protein of unknown function%2C
DUF584) | Chr4:13533643-13534077 REVERSE LENGTH=144 |
201606
Length = 144
Score = 65.5 bits (158), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 13/113 (11%)
Query: 112 SSSRMIPSIPKPKSPRERDYFLSLPSGKIHHQSAPVNVPVLSNAAKMKKSRVYEEDDVDE 171
S+ ++PS P+ R+R ++ + QS PVNVP S + K +V ++++V
Sbjct: 45 STQTLLPSEPRMIPERQRTEGMA----PMRQQSVPVNVPDWSMVQRKKTKKVVDDENVSP 100
Query: 172 EDEMLPPHEIVARGSGRSPKTTFSVLEGVGRTLKGRDLRQVRNAVFRQTGFLD 224
E+ L ++ SV+EGVGR LKGRDL +VRNA+ +QTGFL+
Sbjct: 101 EEYFL---------RRSRSSSSSSVMEGVGRKLKGRDLSKVRNAILKQTGFLE 144