BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1100.1
(444 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06140.1 | sorting nexin 1 | Chr5:1856212-1858752 REVERSE LEN... 593 0.0
AT5G07120.2 | sorting nexin 2B | Chr5:2207065-2209355 REVERSE LE... 116 1e-27
AT5G07120.1 | sorting nexin 2B | Chr5:2207065-2209355 REVERSE LE... 116 1e-27
AT5G58440.1 | sorting nexin 2A | Chr5:23624154-23626676 REVERSE ... 114 4e-27
AT5G07120.3 | sorting nexin 2B | Chr5:2207410-2209355 REVERSE LE... 113 8e-27
>AT5G06140.1 | sorting nexin 1 | Chr5:1856212-1858752 REVERSE
LENGTH=402 | 201606
Length = 402
Score = 593 bits (1530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 290/379 (76%), Positives = 323/379 (85%), Gaps = 1/379 (0%)
Query: 64 FISFSEKDPVKLRNGLQTYISYRVITKTNFPDYQGPEKIVIRRYSDFEWLRDRLLGKYKG 123
++S S DPVKL NG+Q YISYRVITKTN P+YQGPEKIVIRRYSDF WLRDRL KYKG
Sbjct: 25 YLSVSVTDPVKLGNGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDFVWLRDRLFEKYKG 84
Query: 124 IFMPPFPEKNVVEKFRFSGEFIEMRRQALDIFVNRIASHPDLQQSEDLRTFLQADEEAMQ 183
IF+PP PEK+ VEKFRFS EFIEMRR ALDIFVNRIA HP+LQQSEDLRTFLQADEE M
Sbjct: 85 IFIPPLPEKSAVEKFRFSAEFIEMRRAALDIFVNRIALHPELQQSEDLRTFLQADEETMD 144
Query: 184 RARSQEIGIFKKKPADLMQIFKDVQSKVSHVVLGKEKPIKESNAEYEKLKQYVFELEDHL 243
R R QE IFKK PADLMQ+F+DVQSKVS VLGKEKP++E+ A+YEKLK Y+FELE+HL
Sbjct: 145 RFRFQETSIFKK-PADLMQMFRDVQSKVSDAVLGKEKPVEETTADYEKLKHYIFELENHL 203
Query: 244 LEAQKHAFRLVKRHGELGQSLSVFGKAVKLLGACEGKNLGKAFSDLGTKSELLSVKLQKE 303
EAQKHA+RLVKRH ELGQSL FGKAVKLLGACEG+ GKAFSDLGTKSELLS+KLQKE
Sbjct: 204 TEAQKHAYRLVKRHRELGQSLLDFGKAVKLLGACEGEPTGKAFSDLGTKSELLSIKLQKE 263
Query: 304 AHHLLMTFEEPLKDYVRAVQSIKATMVERANAFKQHCELAEAIKQKEIDLDILMLIRSDK 363
A +LM FEEPLKDYVR VQSIKAT+ ER AFKQHCEL+E K KEI+LD LML RSDK
Sbjct: 264 AQQVLMNFEEPLKDYVRYVQSIKATIAERGTAFKQHCELSETTKLKEINLDKLMLTRSDK 323
Query: 364 VGETEHEYKELKAEGVEARRRFETIVRLMSEEMVRFQEQKTLDMGLAFHEFAKGQAHLAN 423
VGE E EY+E+KAE EA RRFE IV+ M +E+VRFQEQKT +MG+AFH+FAKGQA LAN
Sbjct: 324 VGEAEIEYREIKAESEEATRRFERIVKRMEDEIVRFQEQKTEEMGVAFHQFAKGQARLAN 383
Query: 424 EIADAWRSLLPKLEACSNM 442
+ADAWRSLLPKLEA ++
Sbjct: 384 SVADAWRSLLPKLEASYSV 402
>AT5G07120.2 | sorting nexin 2B | Chr5:2207065-2209355 REVERSE
LENGTH=572 | 201606
Length = 572
Score = 116 bits (290), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 183/397 (46%), Gaps = 46/397 (11%)
Query: 78 GLQTYISYRVITKTNFPDYQGPEKIVIRRYSDFEWLRDRLLGKYKGIFMPPFPEKNVVE- 136
G TYI+Y++ T+TN DY G E V RR+ D L DRL Y+G +PP P+K++VE
Sbjct: 162 GGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVES 221
Query: 137 KFRFSGEFIEMRRQALDIFVNRIASHPDLQQSEDLRTFLQA--------DEEAMQR---- 184
+ EF+E RR AL+ ++ R+ +HP ++ S++L+ FLQA + R
Sbjct: 222 QVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDG 281
Query: 185 --------------ARSQEIGIFKKKPADLMQIFKDVQSKVSHVVLGKEKPIKESNAEYE 230
A S E+ + D +++FK+++ VS+ G + P+ E + E+
Sbjct: 282 AVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFL 341
Query: 231 KLKQYVFELEDHLLEAQKHAFRLVKRHGELGQSLSVFGKAVKLLGACEGK----NLGKA- 285
+ K+ +++LE ++ A + A LVK ++G+++ G A L E + N +A
Sbjct: 342 EKKEKMYDLEQQIINASQQAESLVKAQQDMGETMGELGLAFIKLTKFENEEAVFNSQRAR 401
Query: 286 ---FSDLGTKSELLSVKLQKEAHHLLMTFEEPLKDYVRAVQSIKATMVERANAFKQHCEL 342
+L T S + + + +E + + + L DY+ + +++ +R++A L
Sbjct: 402 ANDMKNLAT-SAVKASRFYRELNSQTVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTL 460
Query: 343 AEAIKQKEIDLDILMLIRSDKVGETEHEYKELK--AEGVE--------ARRRFETIVRLM 392
+ E + L + S G + K+++ E ++ A R +E I
Sbjct: 461 LSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENN 520
Query: 393 SEEMVRFQEQKTLDMGLAFHEFAKGQAHLANEIADAW 429
E+ R ++ D F Q A +IA+ W
Sbjct: 521 WSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVW 557
>AT5G07120.1 | sorting nexin 2B | Chr5:2207065-2209355 REVERSE
LENGTH=572 | 201606
Length = 572
Score = 116 bits (290), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 183/397 (46%), Gaps = 46/397 (11%)
Query: 78 GLQTYISYRVITKTNFPDYQGPEKIVIRRYSDFEWLRDRLLGKYKGIFMPPFPEKNVVE- 136
G TYI+Y++ T+TN DY G E V RR+ D L DRL Y+G +PP P+K++VE
Sbjct: 162 GGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVES 221
Query: 137 KFRFSGEFIEMRRQALDIFVNRIASHPDLQQSEDLRTFLQA--------DEEAMQR---- 184
+ EF+E RR AL+ ++ R+ +HP ++ S++L+ FLQA + R
Sbjct: 222 QVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDG 281
Query: 185 --------------ARSQEIGIFKKKPADLMQIFKDVQSKVSHVVLGKEKPIKESNAEYE 230
A S E+ + D +++FK+++ VS+ G + P+ E + E+
Sbjct: 282 AVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFL 341
Query: 231 KLKQYVFELEDHLLEAQKHAFRLVKRHGELGQSLSVFGKAVKLLGACEGK----NLGKA- 285
+ K+ +++LE ++ A + A LVK ++G+++ G A L E + N +A
Sbjct: 342 EKKEKMYDLEQQIINASQQAESLVKAQQDMGETMGELGLAFIKLTKFENEEAVFNSQRAR 401
Query: 286 ---FSDLGTKSELLSVKLQKEAHHLLMTFEEPLKDYVRAVQSIKATMVERANAFKQHCEL 342
+L T S + + + +E + + + L DY+ + +++ +R++A L
Sbjct: 402 ANDMKNLAT-SAVKASRFYRELNSQTVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTL 460
Query: 343 AEAIKQKEIDLDILMLIRSDKVGETEHEYKELK--AEGVE--------ARRRFETIVRLM 392
+ E + L + S G + K+++ E ++ A R +E I
Sbjct: 461 LSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENN 520
Query: 393 SEEMVRFQEQKTLDMGLAFHEFAKGQAHLANEIADAW 429
E+ R ++ D F Q A +IA+ W
Sbjct: 521 WSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVW 557
>AT5G58440.1 | sorting nexin 2A | Chr5:23624154-23626676 REVERSE
LENGTH=587 | 201606
Length = 587
Score = 114 bits (285), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 78 GLQTYISYRVITKTNFPDYQGPEKIVIRR-YSDFEWLRDRLLGKYKGIFMPPFPEKNVVE 136
G TYI+Y++ T+TN PD+ GP + +RR + D L DRL Y+G +PP P+K+VVE
Sbjct: 172 GGNTYITYQITTRTNLPDFGGPSEFSVRRRFRDVVTLADRLAETYRGFCIPPRPDKSVVE 231
Query: 137 -KFRFSGEFIEMRRQALDIFVNRIASHPDLQQSEDLRTFLQA------------------ 177
+ EF+E RR AL+ ++ R+++HP ++ S++L+ FLQ
Sbjct: 232 SQVMQKQEFVEQRRVALEKYLRRLSAHPVIRNSDELKVFLQVQGKLPLPMSTDVASRMLD 291
Query: 178 ----------DEEAMQRARSQEIGIFKKKPADLMQIFKDVQSKVSHVVLGKEKPIKESNA 227
E E+G + DL+++FK+++ VS+ G + P+ E +
Sbjct: 292 GAVKLPKQLFGEGGASAVPVTEVGQPARGGRDLLRLFKELRQSVSNDWGGSKPPVVEEDK 351
Query: 228 EYEKLKQYVFELEDHLLEAQKHAFRLVKRHGELGQSLSVFGKA 270
E+ + K+ + +LE ++ A + A LVK ++G+++ G A
Sbjct: 352 EFLEKKEKMHDLEQQIINASQQAESLVKAQQDMGETMGELGLA 394
>AT5G07120.3 | sorting nexin 2B | Chr5:2207410-2209355 REVERSE
LENGTH=567 | 201606
Length = 567
Score = 113 bits (283), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 148/294 (50%), Gaps = 36/294 (12%)
Query: 78 GLQTYISYRVITKTNFPDYQGPEKIVIRRYSDFEWLRDRLLGKYKGIFMPPFPEKNVVE- 136
G TYI+Y++ T+TN DY G E V RR+ D L DRL Y+G +PP P+K++VE
Sbjct: 162 GGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVES 221
Query: 137 KFRFSGEFIEMRRQALDIFVNRIASHPDLQQSEDLRTFLQA--------DEEAMQR---- 184
+ EF+E RR AL+ ++ R+ +HP ++ S++L+ FLQA + R
Sbjct: 222 QVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDG 281
Query: 185 --------------ARSQEIGIFKKKPADLMQIFKDVQSKVSHVVLGKEKPIKESNAEYE 230
A S E+ + D +++FK+++ VS+ G + P+ E + E+
Sbjct: 282 AVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFL 341
Query: 231 KLKQYVFELEDHLLEAQKHAFRLVKRHGELGQSLSVFGKAVKLLGACEGK----NLGKA- 285
+ K+ +++LE ++ A + A LVK ++G+++ G A L E + N +A
Sbjct: 342 EKKEKMYDLEQQIINASQQAESLVKAQQDMGETMGELGLAFIKLTKFENEEAVFNSQRAR 401
Query: 286 ---FSDLGTKSELLSVKLQKEAHHLLMTFEEPLKDYVRAVQSIKATMVERANAF 336
+L T S + + + +E + + + L DY+ + +++ +R++A
Sbjct: 402 ANDMKNLAT-SAVKASRFYRELNSQTVKHLDTLHDYLGLMMAVQGAFADRSSAL 454