BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g1120.1
         (136 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE ...    66   2e-14
AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444 REVE...    60   4e-12
AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825 REVE...    51   5e-09

>AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE
           LENGTH=161 | 201606
          Length = 161

 Score = 66.2 bits (160), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 70/136 (51%), Gaps = 25/136 (18%)

Query: 1   MGSDCIS---NYANGDRVLL-PMRPTYVNLYKWPESDAEFVRTLSSGSSSGASGGVGNVP 56
           M S CIS   N A+  RV + P+R +YVNLYKWPESDAEFVR++  G    A+  V ++ 
Sbjct: 1   MNSVCISSCINDAHDPRVPVRPVRASYVNLYKWPESDAEFVRSVRRGGGLPAARVVDSIS 60

Query: 57  MNNDQMRRFFSRQRYLRSYTFT-----TKKETVLERTR-KCLKKV-----FQRNKKNTNV 105
                      RQ YLRSYTF+     +K E V   T+  CL +V      +R  K  N 
Sbjct: 61  C----------RQMYLRSYTFSREDDESKSEKVSSGTQTSCLGRVKGTASSRRKSKEENG 110

Query: 106 NNVSDSSDNNNNGSKR 121
             + +S+     G KR
Sbjct: 111 IIIVESTKPRRRGEKR 126


>AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444
          REVERSE LENGTH=141 | 201606
          Length = 141

 Score = 59.7 bits (143), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 12/81 (14%)

Query: 1  MGSDCISNYANGDRVLLPMRP--TYVNLYKWPESDAEFVRTLSSGSSSGASGGVGNVPMN 58
          M S CI +  N  R  + +RP  TY NLYKWP ++AEFVR+++   S   +  V ++   
Sbjct: 1  MASKCIDDCVNIKRDSICVRPVMTYANLYKWPMAEAEFVRSINHDGSQHRTTVVDSIS-- 58

Query: 59 NDQMRRFFSRQRYLRSYTFTT 79
                   RQ YLRSYTF+T
Sbjct: 59 --------CRQMYLRSYTFST 71


>AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825
          REVERSE LENGTH=124 | 201606
          Length = 124

 Score = 51.2 bits (121), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 12/84 (14%)

Query: 1  MGSDCISNYANGDRVLLPMRP--TYVNLYKWPESDAEFVRTLSSGSSSGASGGVGNVPMN 58
          M S CI +  N     + +RP  T+  ++KWP ++ EFV+++S   S          P  
Sbjct: 1  MASKCIGDCVNIKNNAICVRPGRTHAKIHKWPMAEVEFVQSISQDGS----------PRR 50

Query: 59 NDQMRRFFSRQRYLRSYTFTTKKE 82
             +     RQ YLRSYTF+ K+E
Sbjct: 51 TTAVESLSCRQMYLRSYTFSRKEE 74


Top