BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1120.1
(136 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE ... 66 2e-14
AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444 REVE... 60 4e-12
AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825 REVE... 51 5e-09
>AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE
LENGTH=161 | 201606
Length = 161
Score = 66.2 bits (160), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 70/136 (51%), Gaps = 25/136 (18%)
Query: 1 MGSDCIS---NYANGDRVLL-PMRPTYVNLYKWPESDAEFVRTLSSGSSSGASGGVGNVP 56
M S CIS N A+ RV + P+R +YVNLYKWPESDAEFVR++ G A+ V ++
Sbjct: 1 MNSVCISSCINDAHDPRVPVRPVRASYVNLYKWPESDAEFVRSVRRGGGLPAARVVDSIS 60
Query: 57 MNNDQMRRFFSRQRYLRSYTFT-----TKKETVLERTR-KCLKKV-----FQRNKKNTNV 105
RQ YLRSYTF+ +K E V T+ CL +V +R K N
Sbjct: 61 C----------RQMYLRSYTFSREDDESKSEKVSSGTQTSCLGRVKGTASSRRKSKEENG 110
Query: 106 NNVSDSSDNNNNGSKR 121
+ +S+ G KR
Sbjct: 111 IIIVESTKPRRRGEKR 126
>AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444
REVERSE LENGTH=141 | 201606
Length = 141
Score = 59.7 bits (143), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 1 MGSDCISNYANGDRVLLPMRP--TYVNLYKWPESDAEFVRTLSSGSSSGASGGVGNVPMN 58
M S CI + N R + +RP TY NLYKWP ++AEFVR+++ S + V ++
Sbjct: 1 MASKCIDDCVNIKRDSICVRPVMTYANLYKWPMAEAEFVRSINHDGSQHRTTVVDSIS-- 58
Query: 59 NDQMRRFFSRQRYLRSYTFTT 79
RQ YLRSYTF+T
Sbjct: 59 --------CRQMYLRSYTFST 71
>AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825
REVERSE LENGTH=124 | 201606
Length = 124
Score = 51.2 bits (121), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 1 MGSDCISNYANGDRVLLPMRP--TYVNLYKWPESDAEFVRTLSSGSSSGASGGVGNVPMN 58
M S CI + N + +RP T+ ++KWP ++ EFV+++S S P
Sbjct: 1 MASKCIGDCVNIKNNAICVRPGRTHAKIHKWPMAEVEFVQSISQDGS----------PRR 50
Query: 59 NDQMRRFFSRQRYLRSYTFTTKKE 82
+ RQ YLRSYTF+ K+E
Sbjct: 51 TTAVESLSCRQMYLRSYTFSRKEE 74