BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1140.1
(774 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 577 0.0
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 577 0.0
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 211 5e-63
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 101 3e-25
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 102 1e-24
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 577 bits (1486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 285/583 (48%), Positives = 391/583 (67%), Gaps = 21/583 (3%)
Query: 204 DSPRPS-----RHRRPPSRLNDYICNALPSTTSHDMVSYPLTNFISFDSFSDHHKIFLAS 258
D P PS R R P+ L DY C+++ S T HD ++ F+S++ S + FL
Sbjct: 25 DVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHD-----ISQFLSYEKVSPLYHSFLVC 79
Query: 259 VLSNTEPRNYSQAMTSSHWREAMAKEISALESNKTWSLVELPPGKRPIGCKWVYKIKHRS 318
+ EP Y++A W AM EI A+E+ TW + LPP K+PIGCKWVYKIK+ S
Sbjct: 80 IAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS 139
Query: 319 DGSIERYKARLVAKGYTQIEGLDYTDTFAPVAKLVTVRALLSLASIQGWTLHQLDVNNAF 378
DG+IERYKARLVAKGYTQ EG+D+ +TF+PV KL +V+ +L++++I +TLHQLD++NAF
Sbjct: 140 DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAF 199
Query: 379 LQGDLEEEVYMKLPPGFSTK-GE----QRVCKLNKSLYGLKQASRQWFSKFSSVLLQRGF 433
L GDL+EE+YMKLPPG++ + G+ VC L KS+YGLKQASRQWF KFS L+ GF
Sbjct: 200 LNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGF 259
Query: 434 VQSFADYSLFTYSKGHCRIYVLVYVDNIIITGNNDSAISSLKDFLDKTFSLKDLGLLKYF 493
VQS +D++ F + VLVYVD+III NND+A+ LK L F L+DLG LKYF
Sbjct: 260 VQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319
Query: 494 LGIEVSRSSKGIFLCQRRYTLDILEDSGLTASRPSSFPMDQKLRLTSDDGTLLPDPTPYR 553
LG+E++RS+ GI +CQR+Y LD+L+++GL +PSS PMD + ++ G D YR
Sbjct: 320 LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR 379
Query: 554 RLIGRLIYLTVTRPDITFAVNTLSQFMQSPRSSHLDAAHKVLRYLKGSFGKGIFLSSSSS 613
RLIGRL+YL +TR DI+FAVN LSQF ++PR +H A K+L Y+KG+ G+G+F SS +
Sbjct: 380 RLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE 439
Query: 614 LHVSGYSDSDWAGCPTSRKSTTGYITFLGTSPLSWKSKKQSTIARSSAEAEYRALASLTC 673
+ + +SD+ + C +R+ST GY FLGTS +SWKSKKQ +++SSAEAEYRAL+ T
Sbjct: 440 MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 499
Query: 674 ELQWLKFLLHDLGVSHNDPMSVFCDNKAALHIAENPVFHERTKHIEIDCHLVREK-IKTK 732
E+ WL +L + + P +FCDN AA+HIA N VFHERTKHIE DCH VRE+ +
Sbjct: 500 EMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQA 559
Query: 733 LIAPCYTSTKEQLADIFTK---PLGADTFQHLIGKLGISNLSA 772
++ + + EQ D FT+ P+ T +++ G++ L A
Sbjct: 560 TLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 577 bits (1486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 285/583 (48%), Positives = 391/583 (67%), Gaps = 21/583 (3%)
Query: 204 DSPRPS-----RHRRPPSRLNDYICNALPSTTSHDMVSYPLTNFISFDSFSDHHKIFLAS 258
D P PS R R P+ L DY C+++ S T HD ++ F+S++ S + FL
Sbjct: 25 DVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHD-----ISQFLSYEKVSPLYHSFLVC 79
Query: 259 VLSNTEPRNYSQAMTSSHWREAMAKEISALESNKTWSLVELPPGKRPIGCKWVYKIKHRS 318
+ EP Y++A W AM EI A+E+ TW + LPP K+PIGCKWVYKIK+ S
Sbjct: 80 IAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS 139
Query: 319 DGSIERYKARLVAKGYTQIEGLDYTDTFAPVAKLVTVRALLSLASIQGWTLHQLDVNNAF 378
DG+IERYKARLVAKGYTQ EG+D+ +TF+PV KL +V+ +L++++I +TLHQLD++NAF
Sbjct: 140 DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAF 199
Query: 379 LQGDLEEEVYMKLPPGFSTK-GE----QRVCKLNKSLYGLKQASRQWFSKFSSVLLQRGF 433
L GDL+EE+YMKLPPG++ + G+ VC L KS+YGLKQASRQWF KFS L+ GF
Sbjct: 200 LNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGF 259
Query: 434 VQSFADYSLFTYSKGHCRIYVLVYVDNIIITGNNDSAISSLKDFLDKTFSLKDLGLLKYF 493
VQS +D++ F + VLVYVD+III NND+A+ LK L F L+DLG LKYF
Sbjct: 260 VQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319
Query: 494 LGIEVSRSSKGIFLCQRRYTLDILEDSGLTASRPSSFPMDQKLRLTSDDGTLLPDPTPYR 553
LG+E++RS+ GI +CQR+Y LD+L+++GL +PSS PMD + ++ G D YR
Sbjct: 320 LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR 379
Query: 554 RLIGRLIYLTVTRPDITFAVNTLSQFMQSPRSSHLDAAHKVLRYLKGSFGKGIFLSSSSS 613
RLIGRL+YL +TR DI+FAVN LSQF ++PR +H A K+L Y+KG+ G+G+F SS +
Sbjct: 380 RLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE 439
Query: 614 LHVSGYSDSDWAGCPTSRKSTTGYITFLGTSPLSWKSKKQSTIARSSAEAEYRALASLTC 673
+ + +SD+ + C +R+ST GY FLGTS +SWKSKKQ +++SSAEAEYRAL+ T
Sbjct: 440 MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 499
Query: 674 ELQWLKFLLHDLGVSHNDPMSVFCDNKAALHIAENPVFHERTKHIEIDCHLVREK-IKTK 732
E+ WL +L + + P +FCDN AA+HIA N VFHERTKHIE DCH VRE+ +
Sbjct: 500 EMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQA 559
Query: 733 LIAPCYTSTKEQLADIFTK---PLGADTFQHLIGKLGISNLSA 772
++ + + EQ D FT+ P+ T +++ G++ L A
Sbjct: 560 TLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 211 bits (537), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 153/226 (67%), Gaps = 1/226 (0%)
Query: 452 IYVLVYVDNIIITGNNDSAISSLKDFLDKTFSLKDLGLLKYFLGIEVSRSSKGIFLCQRR 511
+Y+L+YVD+I++TG++++ ++ L L TFS+KDLG + YFLGI++ G+FL Q +
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 512 YTLDILEDSGLTASRPSSFPMDQKLRLTSDDGTLLPDPTPYRRLIGRLIYLTVTRPDITF 571
Y IL ++G+ +P S P+ KL +S PDP+ +R ++G L YLT+TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 572 AVNTLSQFMQSPRSSHLDAAHKVLRYLKGSFGKGIFLSSSSSLHVSGYSDSDWAGCPTSR 631
AVN + Q M P + D +VLRY+KG+ G+++ +S L+V + DSDWAGC ++R
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 632 KSTTGYITFLGTSPLSWKSKKQSTIARSSAEAEYRALASLTCELQW 677
+STTG+ TFLG + +SW +K+Q T++RSS E EYRALA EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 101 bits (251), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 63/82 (76%)
Query: 560 IYLTVTRPDITFAVNTLSQFMQSPRSSHLDAAHKVLRYLKGSFGKGIFLSSSSSLHVSGY 619
+YLT+TRPD+TFAVN LSQF + R++ + A +KVL Y+KG+ G+G+F S++S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 620 SDSDWAGCPTSRKSTTGYITFL 641
+DSDWA CP +R+S TG+ + +
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 102 bits (253), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 68/99 (68%)
Query: 264 EPRNYSQAMTSSHWREAMAKEISALESNKTWSLVELPPGKRPIGCKWVYKIKHRSDGSIE 323
EP++ A+ W +AM +E+ AL NKTW LV P + +GCKWV+K K SDG+++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 324 RYKARLVAKGYTQIEGLDYTDTFAPVAKLVTVRALLSLA 362
R KARLVAKG+ Q EG+ + +T++PV + T+R +L++A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125