BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g1160.1
         (346 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18220.1 | Noc2p family | Chr2:7928254-7931851 FORWARD LENGTH...    50   2e-06
AT1G40087.1 | Plant transposase (Ptta/En/Spm family) | Chr1:1499...    46   3e-05

>AT2G18220.1 | Noc2p family | Chr2:7928254-7931851 FORWARD
           LENGTH=764 | 201606
          Length = 764

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 35/48 (72%)

Query: 11  LNSTLFFLNQVTASEILTHALIQLRASTIFFAAFPSLQRRLIKYPVYF 58
           L ++L  LNQ+T +E++T  L +L+ S++F AAFPSL R+ IK  ++F
Sbjct: 236 LGNSLHVLNQMTDTEMITFTLRRLKHSSVFLAAFPSLLRKYIKVALHF 283


>AT1G40087.1 | Plant transposase (Ptta/En/Spm family) |
           Chr1:14999762-15001868 REVERSE LENGTH=390 | 201606
          Length = 390

 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 16/189 (8%)

Query: 131 NIEQCKSCVPPGVAATQWFGVVDYWSKDSVQKVAETNMMNKAKNMYPYCGGR-------- 182
           N+ +     P  V   QW  +V     D  +K+ E N  N+  ++ P+  GR        
Sbjct: 159 NLNETLQNRPEKVPEDQWSHLVHLIFTDKWRKMQERNTKNQKNHIMPHLCGRKSFSRKRD 218

Query: 183 -LEKKYGTKASRLQVWKKTRLRSDGTWVTEEAGIFAEKCDSVLEQRRSENTSGCEYVDTP 241
            ++ K G    R + + ++R + DG++V++EA + AE   ++L        +G   +D  
Sbjct: 219 EIKIKTGKTPCRAEFFIESRKKHDGSFVSDEAKLRAEALTTLLNLNPQVTYNGTASLD-- 276

Query: 242 GPNDVFGSQMPPETRGRIRLMPFASPKEAGFKKPNSGVISNLQNEN--NQLRKEVDQLME 299
              D +     PE  GR+R +          +  N+    +++N     QL+ +V  L +
Sbjct: 277 ---DEYSQVFGPERPGRVRCVGRGPTPSRLVRHSNATRRQDIENSELVAQLKTQVKTLGD 333

Query: 300 GQTAMREMI 308
              AM   +
Sbjct: 334 QVNAMSTFL 342

Top