BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1170.1
(105 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14320.1 | Zinc-binding ribosomal protein family protein | Ch... 201 8e-69
AT3G23390.1 | Zinc-binding ribosomal protein family protein | Ch... 201 8e-69
AT4G14320.2 | Zinc-binding ribosomal protein family protein | Ch... 179 3e-59
>AT4G14320.1 | Zinc-binding ribosomal protein family protein |
Chr4:8242684-8243805 REVERSE LENGTH=105 | 201606
Length = 105
Score = 201 bits (512), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 100/105 (95%), Positives = 101/105 (96%)
Query: 1 MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60
MVN+PKTK TYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1 MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 61 KAKTTKKIVLRLQCQSCKHMSQHAIKRCKHFEIGGDKKGKGTSLF 105
KAKTTKKIVLRLQCQSCKH SQ IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61 KAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105
>AT3G23390.1 | Zinc-binding ribosomal protein family protein |
Chr3:8375427-8376224 FORWARD LENGTH=105 | 201606
Length = 105
Score = 201 bits (512), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 100/105 (95%), Positives = 101/105 (96%)
Query: 1 MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60
MVN+PKTK TYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1 MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 61 KAKTTKKIVLRLQCQSCKHMSQHAIKRCKHFEIGGDKKGKGTSLF 105
KAKTTKKIVLRLQCQSCKH SQ IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61 KAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTSLF 105
>AT4G14320.2 | Zinc-binding ribosomal protein family protein |
Chr4:8241841-8243805 REVERSE LENGTH=154 | 201606
Length = 154
Score = 179 bits (453), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 88/93 (94%), Positives = 89/93 (95%)
Query: 1 MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60
MVN+PKTK TYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1 MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 61 KAKTTKKIVLRLQCQSCKHMSQHAIKRCKHFEI 93
KAKTTKKIVLRLQCQSCKH SQ IKRCKHFEI
Sbjct: 61 KAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEI 93