BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1180.1
(133 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G36210.1 | SAUR-like auxin-responsive protein family | Chr2:1... 130 6e-40
AT3G43120.1 | SAUR-like auxin-responsive protein family | Chr3:1... 87 3e-22
AT5G20810.1 | SAUR-like auxin-responsive protein family | Chr5:7... 85 1e-21
AT5G20810.2 | SAUR-like auxin-responsive protein family | Chr5:7... 85 3e-21
AT2G37030.1 | SAUR-like auxin-responsive protein family | Chr2:1... 77 8e-19
>AT2G36210.1 | SAUR-like auxin-responsive protein family |
Chr2:15186326-15186733 REVERSE LENGTH=135 | 201606
Length = 135
Score = 130 bits (328), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Query: 1 MLGKKMESVKKLAKKVKVISSGGSVGGSGRRSSAHFESLL-SEFEESP---TTTPTGFLA 56
MLGK++ S K LAKK+K I++ GG G S + ESLL +E +E+ + TPTG A
Sbjct: 1 MLGKRIASFKNLAKKMKSINTTTRSGGEGGSESTYNESLLMNEADEAAMMASKTPTGTFA 60
Query: 57 IYVGEERQRFVVPTGFLSHPLFKMLLEKTQAEF-GFEQRNGLVIPCSVSTFEEVVSVVEC 115
+YVGEER + VVPT +L+HPLF+MLL+K+ EF FEQ+ LV+PCS+S F++VV+ VE
Sbjct: 61 VYVGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLCFEQKVMLVVPCSLSVFQDVVNAVES 120
Query: 116 CHGQFDIARLVDEF 129
C+G FD V+EF
Sbjct: 121 CNGNFDFGEFVEEF 134
>AT3G43120.1 | SAUR-like auxin-responsive protein family |
Chr3:15094644-15095312 FORWARD LENGTH=160 | 201606
Length = 160
Score = 86.7 bits (213), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 45 ESPTTTPTGFLAIYVGEERQRFVVPTGFLSHPLFKMLLEKTQAEFGFEQRNGLVIPCSVS 104
E P P G+LA+YVG E +RF++PT FLSH LFK+LLEK + E+GF+ L IPC V
Sbjct: 74 EPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVE 133
Query: 105 TFEEVVSVVE 114
TF+ ++ +E
Sbjct: 134 TFKYLLKCIE 143
>AT5G20810.1 | SAUR-like auxin-responsive protein family |
Chr5:7044791-7045555 FORWARD LENGTH=165 | 201606
Length = 165
Score = 85.1 bits (209), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 45 ESPTTTPTGFLAIYVGEERQRFVVPTGFLSHPLFKMLLEKTQAEFGFEQRNGLVIPCSVS 104
E P P G LA+YVG E +RF++PT +LSH LFK+LLEK + EFGF+Q L IPC V
Sbjct: 74 EPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVE 133
Query: 105 TFEEVVSVVE 114
TF+ ++ +E
Sbjct: 134 TFKYLLKCME 143
>AT5G20810.2 | SAUR-like auxin-responsive protein family |
Chr5:7044791-7045363 FORWARD LENGTH=190 | 201606
Length = 190
Score = 84.7 bits (208), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 45 ESPTTTPTGFLAIYVGEERQRFVVPTGFLSHPLFKMLLEKTQAEFGFEQRNGLVIPCSVS 104
E P P G LA+YVG E +RF++PT +LSH LFK+LLEK + EFGF+Q L IPC V
Sbjct: 74 EPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVE 133
Query: 105 TFEEVVSVVE 114
TF+ ++ +E
Sbjct: 134 TFKYLLKCME 143
>AT2G37030.1 | SAUR-like auxin-responsive protein family |
Chr2:15553732-15554106 FORWARD LENGTH=124 | 201606
Length = 124
Score = 76.6 bits (187), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 1 MLGKKMESVKKLAKKV--KVISSGGSVGGSGRRSSAHFESLLSEFEESPTTTPTGFLAIY 58
M K ++S +K KK+ KVI S R F+ E E P P G L +Y
Sbjct: 1 MKSKFIKSCEKKLKKMTSKVIIPCASCESCYERICWAFKK---EAEVIPRDVPKGHLVVY 57
Query: 59 VGEERQRFVVPTGFLSHPLFKMLLEKTQAEFGFEQRNGLVIPCSVSTFEEVV 110
VGEE +RFV+ L HPLF+ LL++ Q +GF + L IPC+ STF +VV
Sbjct: 58 VGEEYKRFVININLLKHPLFQALLDQAQDAYGFSADSRLWIPCNESTFLDVV 109