BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1190.1
(335 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54290.1 | hemerythrin HHE cation-binding domain protein | Ch... 330 e-112
>AT3G54290.1 | hemerythrin HHE cation-binding domain protein |
Chr3:20104623-20105845 REVERSE LENGTH=350 | 201606
Length = 350
Score = 330 bits (846), Expect = e-112, Method: Compositional matrix adjust.
Identities = 166/330 (50%), Positives = 222/330 (67%), Gaps = 33/330 (10%)
Query: 1 MGTCVSKPNNS-AEISPSDFTV----------------------------ISPVVKLYGS 31
MGTC S S AEISP D V + V+LYG
Sbjct: 1 MGTCFSSSTKSTAEISPFDLVVKPPPPSAAATAPPTQRIPTAKTETSTVSFTATVRLYGP 60
Query: 32 DSTTLTSLIRIALIYKSVSFQFIPSENT--LLQYGSDTFTGTFETLIRYIEDKFPKPPLL 89
++ +TS +R AL++K V +F+PSE+ +Q GS+T +G+ E L+RYIEDKFP+P L+
Sbjct: 61 PNSLVTSYLRFALLHKKVPLRFVPSEDQKPTIQVGSETVSGSREVLLRYIEDKFPEPRLM 120
Query: 90 DSSVNSPGGNQVVPAIVMVITLQHKSMTWHIQRLMNWAKDLETRGESQAVDLCMGSPVME 149
N G ++ P IV +I LQH+SM WH++R++ W++DL RG +AVD +G+P ME
Sbjct: 121 IWKFNLEGFDEATPLIVKMIWLQHRSMLWHMERMLRWSEDLAARGGKKAVDPSVGTPKME 180
Query: 150 VRKFGRSYSQLLELMLEHAQMEERVIFPVFERADRGISKVVNEDHARDLPIMNGIKEDIK 209
+RKF +SY+ L ELMLEHAQMEER++FPV E DRG+ K NE+H R+LP+MNGIKEDIK
Sbjct: 181 IRKFAKSYTHLQELMLEHAQMEERILFPVLESVDRGMCKSANEEHGRELPMMNGIKEDIK 240
Query: 210 SIGVLVAASPVYQEALLSLSSRFKTLQEHCKEHFEEEETKLLPLLEATEMGKEEQDKMVD 269
SIGVL S + EAL SL+SRFK+LQ CK HFEEEE LLP++EA EMGKE+Q K+++
Sbjct: 241 SIGVL--DSGICSEALFSLASRFKSLQMMCKTHFEEEEKDLLPMVEAAEMGKEKQKKLMN 298
Query: 270 QCLEVMEGSHSHLFNFLILGLLPHDAIQYL 299
Q LEVM G+HS+ F+FL+ GL P +A+QY+
Sbjct: 299 QSLEVMSGTHSNSFDFLLEGLTPQEAMQYI 328