BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1210.1
(277 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54300.3 | vesicle-associated membrane protein 727 | Chr3:201... 316 e-109
AT3G54300.2 | vesicle-associated membrane protein 727 | Chr3:201... 316 e-109
AT3G54300.1 | vesicle-associated membrane protein 727 | Chr3:201... 316 e-109
AT1G04760.2 | vesicle-associated membrane protein 726 | Chr1:133... 234 2e-77
AT1G04760.1 | vesicle-associated membrane protein 726 | Chr1:133... 234 2e-77
>AT3G54300.3 | vesicle-associated membrane protein 727 |
Chr3:20108355-20110127 REVERSE LENGTH=240 | 201606
Length = 240
Score = 316 bits (809), Expect = e-109, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 173/191 (90%), Gaps = 1/191 (0%)
Query: 1 MSRRGLIYSFVAKGTVVLAEHTSFSGNFSTIAVQCLQKLPANSTRHTYSCDGHTFNFLID 60
MS++GLIYSFVAKGTVVLAEHT +SGNFSTIAVQCLQKLP NS+++TYSCDGHTFNFL+D
Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60
Query: 61 NGFVFLVVADEGTGRSVPFMFLERVKDDFKQRYATLIDNERSHPLA-DEEDDDLFEDPLS 119
NGFVFLVVADE TGRSVPF+FLERVK+DFK+RY I N+ HPLA ++EDDDLF D S
Sbjct: 61 NGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFS 120
Query: 120 IAYNLDREFGPKLKEHMVYCTNHPEEISKLSKLKEQMTEVKGIMMDNIEKVLDRGERIEL 179
+AYNLDREFGP LKEHM YC +HPEE+SKLSKLK Q+TEVKGIMMDNIEKVLDRGE+IEL
Sbjct: 121 VAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180
Query: 180 LVDKTENLSFQ 190
LVDKTENL FQ
Sbjct: 181 LVDKTENLQFQ 191
>AT3G54300.2 | vesicle-associated membrane protein 727 |
Chr3:20108355-20110127 REVERSE LENGTH=240 | 201606
Length = 240
Score = 316 bits (809), Expect = e-109, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 173/191 (90%), Gaps = 1/191 (0%)
Query: 1 MSRRGLIYSFVAKGTVVLAEHTSFSGNFSTIAVQCLQKLPANSTRHTYSCDGHTFNFLID 60
MS++GLIYSFVAKGTVVLAEHT +SGNFSTIAVQCLQKLP NS+++TYSCDGHTFNFL+D
Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60
Query: 61 NGFVFLVVADEGTGRSVPFMFLERVKDDFKQRYATLIDNERSHPLA-DEEDDDLFEDPLS 119
NGFVFLVVADE TGRSVPF+FLERVK+DFK+RY I N+ HPLA ++EDDDLF D S
Sbjct: 61 NGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFS 120
Query: 120 IAYNLDREFGPKLKEHMVYCTNHPEEISKLSKLKEQMTEVKGIMMDNIEKVLDRGERIEL 179
+AYNLDREFGP LKEHM YC +HPEE+SKLSKLK Q+TEVKGIMMDNIEKVLDRGE+IEL
Sbjct: 121 VAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180
Query: 180 LVDKTENLSFQ 190
LVDKTENL FQ
Sbjct: 181 LVDKTENLQFQ 191
>AT3G54300.1 | vesicle-associated membrane protein 727 |
Chr3:20108355-20110127 REVERSE LENGTH=240 | 201606
Length = 240
Score = 316 bits (809), Expect = e-109, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 173/191 (90%), Gaps = 1/191 (0%)
Query: 1 MSRRGLIYSFVAKGTVVLAEHTSFSGNFSTIAVQCLQKLPANSTRHTYSCDGHTFNFLID 60
MS++GLIYSFVAKGTVVLAEHT +SGNFSTIAVQCLQKLP NS+++TYSCDGHTFNFL+D
Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60
Query: 61 NGFVFLVVADEGTGRSVPFMFLERVKDDFKQRYATLIDNERSHPLA-DEEDDDLFEDPLS 119
NGFVFLVVADE TGRSVPF+FLERVK+DFK+RY I N+ HPLA ++EDDDLF D S
Sbjct: 61 NGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFS 120
Query: 120 IAYNLDREFGPKLKEHMVYCTNHPEEISKLSKLKEQMTEVKGIMMDNIEKVLDRGERIEL 179
+AYNLDREFGP LKEHM YC +HPEE+SKLSKLK Q+TEVKGIMMDNIEKVLDRGE+IEL
Sbjct: 121 VAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180
Query: 180 LVDKTENLSFQ 190
LVDKTENL FQ
Sbjct: 181 LVDKTENLQFQ 191
>AT1G04760.2 | vesicle-associated membrane protein 726 |
Chr1:1334760-1336070 FORWARD LENGTH=220 | 201606
Length = 220
Score = 234 bits (598), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 140/190 (73%), Gaps = 18/190 (9%)
Query: 1 MSRRGLIYSFVAKGTVVLAEHTSFSGNFSTIAVQCLQKLPANSTRHTYSCDGHTFNFLID 60
M ++ LIYSFVA+GTV+LAE+T F GNF+++A QCLQKLP+++ + TY+CDGHTFN+L D
Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLAD 60
Query: 61 NGFVFLVVADEGTGRSVPFMFLERVKDDFKQRYATLIDNERSHPLADEEDDDLFEDPLSI 120
NGF + VV E GR +P FLERVK+DF +RY + +
Sbjct: 61 NGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGG------------------GKASTAK 102
Query: 121 AYNLDREFGPKLKEHMVYCTNHPEEISKLSKLKEQMTEVKGIMMDNIEKVLDRGERIELL 180
A +L++EFG KLKEHM YC +HPEEISKLSK+K Q+TEVKG+MM+NIEKVLDRGE+IELL
Sbjct: 103 ANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELL 162
Query: 181 VDKTENLSFQ 190
VDKTENL Q
Sbjct: 163 VDKTENLRSQ 172
>AT1G04760.1 | vesicle-associated membrane protein 726 |
Chr1:1334760-1336070 FORWARD LENGTH=220 | 201606
Length = 220
Score = 234 bits (598), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 140/190 (73%), Gaps = 18/190 (9%)
Query: 1 MSRRGLIYSFVAKGTVVLAEHTSFSGNFSTIAVQCLQKLPANSTRHTYSCDGHTFNFLID 60
M ++ LIYSFVA+GTV+LAE+T F GNF+++A QCLQKLP+++ + TY+CDGHTFN+L D
Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLAD 60
Query: 61 NGFVFLVVADEGTGRSVPFMFLERVKDDFKQRYATLIDNERSHPLADEEDDDLFEDPLSI 120
NGF + VV E GR +P FLERVK+DF +RY + +
Sbjct: 61 NGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGG------------------GKASTAK 102
Query: 121 AYNLDREFGPKLKEHMVYCTNHPEEISKLSKLKEQMTEVKGIMMDNIEKVLDRGERIELL 180
A +L++EFG KLKEHM YC +HPEEISKLSK+K Q+TEVKG+MM+NIEKVLDRGE+IELL
Sbjct: 103 ANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELL 162
Query: 181 VDKTENLSFQ 190
VDKTENL Q
Sbjct: 163 VDKTENLRSQ 172