BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1230.1
(151 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G39200.1 | Ribosomal protein S25 family protein | Chr4:182574... 123 3e-37
AT4G34555.1 | Ribosomal protein S25 family protein | Chr4:165043... 122 9e-37
AT2G21580.1 | Ribosomal protein S25 family protein | Chr2:923662... 121 2e-36
AT4G39200.2 | Ribosomal protein S25 family protein | Chr4:182574... 119 1e-35
AT2G16360.1 | 40S ribosomal protein S25 | Chr2:7076713-7077310 R... 119 3e-35
>AT4G39200.1 | Ribosomal protein S25 family protein |
Chr4:18257464-18258464 FORWARD LENGTH=108 | 201606
Length = 108
Score = 123 bits (309), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/87 (89%), Positives = 86/87 (98%)
Query: 1 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLTEAPKYKL 60
MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLLTEAPK+KL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60
Query: 61 ITPSILSDRLRVNGSLARRAIKDLMSK 87
ITPSILSDR+R+NGSLARRAI++LM+K
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAK 87
>AT4G34555.1 | Ribosomal protein S25 family protein |
Chr4:16504381-16505339 REVERSE LENGTH=108 | 201606
Length = 108
Score = 122 bits (306), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/87 (89%), Positives = 86/87 (98%)
Query: 1 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLTEAPKYKL 60
MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLL+EAPK+KL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
Query: 61 ITPSILSDRLRVNGSLARRAIKDLMSK 87
ITPSILSDRLR+NGSLARRAI++LM+K
Sbjct: 61 ITPSILSDRLRINGSLARRAIRELMAK 87
>AT2G21580.1 | Ribosomal protein S25 family protein |
Chr2:9236629-9237510 FORWARD LENGTH=108 | 201606
Length = 108
Score = 121 bits (304), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/87 (88%), Positives = 85/87 (97%)
Query: 1 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLTEAPKYKL 60
MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLLTEAPK+KL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60
Query: 61 ITPSILSDRLRVNGSLARRAIKDLMSK 87
ITPSILSDR+R+NGSLARRAI++LM+K
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAK 87
>AT4G39200.2 | Ribosomal protein S25 family protein |
Chr4:18257464-18258464 FORWARD LENGTH=107 | 201606
Length = 107
Score = 119 bits (299), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/87 (87%), Positives = 84/87 (96%), Gaps = 1/87 (1%)
Query: 1 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLTEAPKYKL 60
MAPKK+K PPPSSKPAKSGGGKQKKK SKGKQKEKVNNMVLFDQA+YDKLLTEAPK+KL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKW-SKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 59
Query: 61 ITPSILSDRLRVNGSLARRAIKDLMSK 87
ITPSILSDR+R+NGSLARRAI++LM+K
Sbjct: 60 ITPSILSDRMRINGSLARRAIRELMAK 86
>AT2G16360.1 | 40S ribosomal protein S25 | Chr2:7076713-7077310
REVERSE LENGTH=109 | 201606
Length = 109
Score = 119 bits (297), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/86 (88%), Positives = 84/86 (97%)
Query: 2 APKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLTEAPKYKLI 61
APKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKL++EAPK+KLI
Sbjct: 2 APKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLI 61
Query: 62 TPSILSDRLRVNGSLARRAIKDLMSK 87
TPSILSDRLR+NGSLAR+AI+DLM K
Sbjct: 62 TPSILSDRLRINGSLARKAIRDLMVK 87