BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1240.1
(502 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00830.6 | RNA-binding (RRM/RBD/RNP motifs) family protein | ... 441 e-151
AT4G00830.2 | RNA-binding (RRM/RBD/RNP motifs) family protein | ... 441 e-151
AT4G00830.1 | RNA-binding (RRM/RBD/RNP motifs) family protein | ... 441 e-151
AT3G52660.3 | RNA-binding (RRM/RBD/RNP motifs) family protein | ... 434 e-149
AT3G52660.2 | RNA-binding (RRM/RBD/RNP motifs) family protein | ... 434 e-149
>AT4G00830.6 | RNA-binding (RRM/RBD/RNP motifs) family protein |
Chr4:352782-354965 FORWARD LENGTH=495 | 201606
Length = 495
Score = 441 bits (1133), Expect = e-151, Method: Compositional matrix adjust.
Identities = 227/451 (50%), Positives = 310/451 (68%), Gaps = 31/451 (6%)
Query: 60 DEVEEEENEDANGADAHESLKIDQEMKDSKDDDESKQHAELLALPPQGSEVYIGGIPNDV 119
++V+EE ED + E+ D++ DD++ ++++ LL+LPP GSEV+IGG+P DV
Sbjct: 68 EDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDV 127
Query: 120 SEEDLKSFCESVGEVTEVRIMKTNKDSRENKGFAFVTFRTKDLATKAIKDLNNTQFKGKK 179
EEDL+ CE +GE+ EVR+MK ++DS ++KG+AFV F+TKD+A KAI++L++ +FKGK
Sbjct: 128 GEEDLRDLCEEIGEIFEVRLMK-DRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKT 186
Query: 180 VKCSSSQPKNRLFIGNIPRSWGEQELRKVLTEVGPGVDVIELVKDPKNSSQNRGFAFIEY 239
++CS S+ KNRLFIGNIP++W E E RKV+ +VGPGV+ IEL+KDP N+++NRGFAF+ Y
Sbjct: 187 IRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLY 246
Query: 240 YNHACAGYSREKMSKPKFKLDSNAPTVSWADPKNS--DSSASSQVKVVYVKNLPKNTTQS 297
YN+ACA YSR+KM FKL+ NAPTV+WADPK+S S+A++QVK +YVKN+P+NT+
Sbjct: 247 YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTE 306
Query: 298 QLKELFEKHGDITKIVLPPAKSGQEKSRYGFIHFAERSSAMKALENENKYEIDGQAIEYS 357
QLKELF++HG++TKIV PP K G K +GF+H+AERSSA+KA+++ +YE++GQ +E
Sbjct: 307 QLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVV 364
Query: 358 LAKPQVEAKGASGANLHSSNLLPTYPPRVGYGMIG------GAYGGGYGAPVVPQQPLIY 411
LAKPQ E K + +S PT P V G GA G G G QP+IY
Sbjct: 365 LAKPQAERKHDPSS--YSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIY 422
Query: 412 GRGPTPAGMAMMPMLLPNGQIGYVLQQPGVHPFTPPPQQRDDRSSRGSGSGGGSSRGGGG 471
GRG P GM M+PMLLP+G++GYVLQQPG+ P P QR R+ R +GS GGS R
Sbjct: 423 GRGAMPTGMQMVPMLLPDGRVGYVLQQPGM-PMAAAPPQRPRRNDRNNGSSGGSGRDNS- 480
Query: 472 STRSGGGSGGGSHGRRHDSGDNSRGGRYRPY 502
H+ N G RYRPY
Sbjct: 481 ----------------HEHDGNRGGRRYRPY 495
>AT4G00830.2 | RNA-binding (RRM/RBD/RNP motifs) family protein |
Chr4:352782-354965 FORWARD LENGTH=495 | 201606
Length = 495
Score = 441 bits (1133), Expect = e-151, Method: Compositional matrix adjust.
Identities = 227/451 (50%), Positives = 310/451 (68%), Gaps = 31/451 (6%)
Query: 60 DEVEEEENEDANGADAHESLKIDQEMKDSKDDDESKQHAELLALPPQGSEVYIGGIPNDV 119
++V+EE ED + E+ D++ DD++ ++++ LL+LPP GSEV+IGG+P DV
Sbjct: 68 EDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDV 127
Query: 120 SEEDLKSFCESVGEVTEVRIMKTNKDSRENKGFAFVTFRTKDLATKAIKDLNNTQFKGKK 179
EEDL+ CE +GE+ EVR+MK ++DS ++KG+AFV F+TKD+A KAI++L++ +FKGK
Sbjct: 128 GEEDLRDLCEEIGEIFEVRLMK-DRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKT 186
Query: 180 VKCSSSQPKNRLFIGNIPRSWGEQELRKVLTEVGPGVDVIELVKDPKNSSQNRGFAFIEY 239
++CS S+ KNRLFIGNIP++W E E RKV+ +VGPGV+ IEL+KDP N+++NRGFAF+ Y
Sbjct: 187 IRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLY 246
Query: 240 YNHACAGYSREKMSKPKFKLDSNAPTVSWADPKNS--DSSASSQVKVVYVKNLPKNTTQS 297
YN+ACA YSR+KM FKL+ NAPTV+WADPK+S S+A++QVK +YVKN+P+NT+
Sbjct: 247 YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTE 306
Query: 298 QLKELFEKHGDITKIVLPPAKSGQEKSRYGFIHFAERSSAMKALENENKYEIDGQAIEYS 357
QLKELF++HG++TKIV PP K G K +GF+H+AERSSA+KA+++ +YE++GQ +E
Sbjct: 307 QLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVV 364
Query: 358 LAKPQVEAKGASGANLHSSNLLPTYPPRVGYGMIG------GAYGGGYGAPVVPQQPLIY 411
LAKPQ E K + +S PT P V G GA G G G QP+IY
Sbjct: 365 LAKPQAERKHDPSS--YSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIY 422
Query: 412 GRGPTPAGMAMMPMLLPNGQIGYVLQQPGVHPFTPPPQQRDDRSSRGSGSGGGSSRGGGG 471
GRG P GM M+PMLLP+G++GYVLQQPG+ P P QR R+ R +GS GGS R
Sbjct: 423 GRGAMPTGMQMVPMLLPDGRVGYVLQQPGM-PMAAAPPQRPRRNDRNNGSSGGSGRDNS- 480
Query: 472 STRSGGGSGGGSHGRRHDSGDNSRGGRYRPY 502
H+ N G RYRPY
Sbjct: 481 ----------------HEHDGNRGGRRYRPY 495
>AT4G00830.1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
Chr4:352782-354965 FORWARD LENGTH=495 | 201606
Length = 495
Score = 441 bits (1133), Expect = e-151, Method: Compositional matrix adjust.
Identities = 227/451 (50%), Positives = 310/451 (68%), Gaps = 31/451 (6%)
Query: 60 DEVEEEENEDANGADAHESLKIDQEMKDSKDDDESKQHAELLALPPQGSEVYIGGIPNDV 119
++V+EE ED + E+ D++ DD++ ++++ LL+LPP GSEV+IGG+P DV
Sbjct: 68 EDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDV 127
Query: 120 SEEDLKSFCESVGEVTEVRIMKTNKDSRENKGFAFVTFRTKDLATKAIKDLNNTQFKGKK 179
EEDL+ CE +GE+ EVR+MK ++DS ++KG+AFV F+TKD+A KAI++L++ +FKGK
Sbjct: 128 GEEDLRDLCEEIGEIFEVRLMK-DRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKT 186
Query: 180 VKCSSSQPKNRLFIGNIPRSWGEQELRKVLTEVGPGVDVIELVKDPKNSSQNRGFAFIEY 239
++CS S+ KNRLFIGNIP++W E E RKV+ +VGPGV+ IEL+KDP N+++NRGFAF+ Y
Sbjct: 187 IRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLY 246
Query: 240 YNHACAGYSREKMSKPKFKLDSNAPTVSWADPKNS--DSSASSQVKVVYVKNLPKNTTQS 297
YN+ACA YSR+KM FKL+ NAPTV+WADPK+S S+A++QVK +YVKN+P+NT+
Sbjct: 247 YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTE 306
Query: 298 QLKELFEKHGDITKIVLPPAKSGQEKSRYGFIHFAERSSAMKALENENKYEIDGQAIEYS 357
QLKELF++HG++TKIV PP K G K +GF+H+AERSSA+KA+++ +YE++GQ +E
Sbjct: 307 QLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVV 364
Query: 358 LAKPQVEAKGASGANLHSSNLLPTYPPRVGYGMIG------GAYGGGYGAPVVPQQPLIY 411
LAKPQ E K + +S PT P V G GA G G G QP+IY
Sbjct: 365 LAKPQAERKHDPSS--YSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIY 422
Query: 412 GRGPTPAGMAMMPMLLPNGQIGYVLQQPGVHPFTPPPQQRDDRSSRGSGSGGGSSRGGGG 471
GRG P GM M+PMLLP+G++GYVLQQPG+ P P QR R+ R +GS GGS R
Sbjct: 423 GRGAMPTGMQMVPMLLPDGRVGYVLQQPGM-PMAAAPPQRPRRNDRNNGSSGGSGRDNS- 480
Query: 472 STRSGGGSGGGSHGRRHDSGDNSRGGRYRPY 502
H+ N G RYRPY
Sbjct: 481 ----------------HEHDGNRGGRRYRPY 495
>AT3G52660.3 | RNA-binding (RRM/RBD/RNP motifs) family protein |
Chr3:19522598-19524735 FORWARD LENGTH=471 | 201606
Length = 471
Score = 434 bits (1117), Expect = e-149, Method: Compositional matrix adjust.
Identities = 205/353 (58%), Positives = 268/353 (75%), Gaps = 8/353 (2%)
Query: 95 KQHAELLALPPQGSEVYIGGIPNDVSEEDLKSFCESVGEVTEVRIMKTNKDSRENKGFAF 154
K+H ELLALPP GSEVY+GGIP D +E DLK FC S+GEVTEVRIM+ KDS + KG+AF
Sbjct: 79 KRHVELLALPPHGSEVYLGGIPTDATEGDLKGFCGSIGEVTEVRIMR-EKDSGDGKGYAF 137
Query: 155 VTFRTKDLATKAIKDLNNTQFKGKKVKCSSSQPKNRLFIGNIPRSWGEQELRKVLTEVGP 214
VTFR+KDLA +AI LNNT F+GK++KCS++Q K+RLF+GN+PR+W E +++K +GP
Sbjct: 138 VTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQAKHRLFLGNVPRNWMESDIKKAANRIGP 197
Query: 215 GVDVIELVKDPKNSSQNRGFAFIEYYNHACAGYSREKMSKPKFKLDSNAPTVSWAD--PK 272
GV ++EL K+P+N +NRGFAFIEYYNHACA YS++KMS P FKLD NAPTVSWA+
Sbjct: 198 GVQIVELPKEPQNMGRNRGFAFIEYYNHACAEYSKQKMSNPSFKLDDNAPTVSWAESRSG 257
Query: 273 NSDSSASSQVKVVYVKNLPKNTTQSQLKELFEKHGDITKIVLPPAKSGQEKSRYGFIHFA 332
S++SQVK +Y+KNLP++ TQ +LK LFE HG I K+V+PPAK G+E SRYGF+H+A
Sbjct: 258 GGGDSSASQVKALYIKNLPRDITQERLKALFEHHGKILKVVIPPAKPGKEDSRYGFVHYA 317
Query: 333 ERSSAMKALENENKYEIDGQAIEYSLAKPQVEAKGASGA--NLHSSNLLPTYPPRVGYGM 390
ER+S M+AL+N +YEIDG ++ +LAKPQ + K + N+ S L P YPP + YGM
Sbjct: 318 ERTSVMRALKNTERYEIDGHMLDCTLAKPQADQKTNTNTVQNVQKSQLQPNYPPLLSYGM 377
Query: 391 IGGAYG--GGYGAPVVPQQPLIYGRGPTPAGMAMMPMLLPNGQIGYVLQQPGV 441
+G GG+GA QPL++ G GM+MMP++LP+G+IGYVLQQPG+
Sbjct: 378 APSPFGALGGFGASAY-SQPLMHAGGHAAGGMSMMPIMLPDGRIGYVLQQPGL 429
>AT3G52660.2 | RNA-binding (RRM/RBD/RNP motifs) family protein |
Chr3:19522598-19524735 FORWARD LENGTH=471 | 201606
Length = 471
Score = 434 bits (1117), Expect = e-149, Method: Compositional matrix adjust.
Identities = 205/353 (58%), Positives = 268/353 (75%), Gaps = 8/353 (2%)
Query: 95 KQHAELLALPPQGSEVYIGGIPNDVSEEDLKSFCESVGEVTEVRIMKTNKDSRENKGFAF 154
K+H ELLALPP GSEVY+GGIP D +E DLK FC S+GEVTEVRIM+ KDS + KG+AF
Sbjct: 79 KRHVELLALPPHGSEVYLGGIPTDATEGDLKGFCGSIGEVTEVRIMR-EKDSGDGKGYAF 137
Query: 155 VTFRTKDLATKAIKDLNNTQFKGKKVKCSSSQPKNRLFIGNIPRSWGEQELRKVLTEVGP 214
VTFR+KDLA +AI LNNT F+GK++KCS++Q K+RLF+GN+PR+W E +++K +GP
Sbjct: 138 VTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQAKHRLFLGNVPRNWMESDIKKAANRIGP 197
Query: 215 GVDVIELVKDPKNSSQNRGFAFIEYYNHACAGYSREKMSKPKFKLDSNAPTVSWAD--PK 272
GV ++EL K+P+N +NRGFAFIEYYNHACA YS++KMS P FKLD NAPTVSWA+
Sbjct: 198 GVQIVELPKEPQNMGRNRGFAFIEYYNHACAEYSKQKMSNPSFKLDDNAPTVSWAESRSG 257
Query: 273 NSDSSASSQVKVVYVKNLPKNTTQSQLKELFEKHGDITKIVLPPAKSGQEKSRYGFIHFA 332
S++SQVK +Y+KNLP++ TQ +LK LFE HG I K+V+PPAK G+E SRYGF+H+A
Sbjct: 258 GGGDSSASQVKALYIKNLPRDITQERLKALFEHHGKILKVVIPPAKPGKEDSRYGFVHYA 317
Query: 333 ERSSAMKALENENKYEIDGQAIEYSLAKPQVEAKGASGA--NLHSSNLLPTYPPRVGYGM 390
ER+S M+AL+N +YEIDG ++ +LAKPQ + K + N+ S L P YPP + YGM
Sbjct: 318 ERTSVMRALKNTERYEIDGHMLDCTLAKPQADQKTNTNTVQNVQKSQLQPNYPPLLSYGM 377
Query: 391 IGGAYG--GGYGAPVVPQQPLIYGRGPTPAGMAMMPMLLPNGQIGYVLQQPGV 441
+G GG+GA QPL++ G GM+MMP++LP+G+IGYVLQQPG+
Sbjct: 378 APSPFGALGGFGASAY-SQPLMHAGGHAAGGMSMMPIMLPDGRIGYVLQQPGL 429