BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1250.1
(105 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G09270.2 | transmembrane protein | Chr5:2879680-2880015 FORWA... 106 4e-31
AT5G09270.1 | transmembrane protein | Chr5:2879680-2880015 FORWA... 106 4e-31
>AT5G09270.2 | transmembrane protein | Chr5:2879680-2880015 FORWARD
LENGTH=111 | 201606
Length = 111
Score = 106 bits (265), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 5 EQQENQPPPQPTNWIERAEKRYLEIKEHAETYPYVWASYIVVYGGFALWTGYRWRKLRKT 64
E QE+QP ++ E++Y ++++HAE YPYVW SY VVYGG LWT YRWRKLR+T
Sbjct: 9 EDQESQPSQVAPGFVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRT 68
Query: 65 ENRVRALQERLKKLVDAEESAASSSSSI-SVGKLPKTMEKK 104
E+RVR LQ +L+KLV+ E++A ++S S SV K +KK
Sbjct: 69 EDRVRGLQTKLRKLVENEQAAVTASKSAQSVDKSSSIPDKK 109
>AT5G09270.1 | transmembrane protein | Chr5:2879680-2880015 FORWARD
LENGTH=111 | 201606
Length = 111
Score = 106 bits (265), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 5 EQQENQPPPQPTNWIERAEKRYLEIKEHAETYPYVWASYIVVYGGFALWTGYRWRKLRKT 64
E QE+QP ++ E++Y ++++HAE YPYVW SY VVYGG LWT YRWRKLR+T
Sbjct: 9 EDQESQPSQVAPGFVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRT 68
Query: 65 ENRVRALQERLKKLVDAEESAASSSSSI-SVGKLPKTMEKK 104
E+RVR LQ +L+KLV+ E++A ++S S SV K +KK
Sbjct: 69 EDRVRGLQTKLRKLVENEQAAVTASKSAQSVDKSSSIPDKK 109