BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1320.1
(232 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14460.1 | LRR and NB-ARC domains-containing disease resistan... 52 2e-07
AT1G59218.3 | Disease resistance protein (CC-NBS-LRR class) fami... 46 2e-05
AT1G59218.2 | Disease resistance protein (CC-NBS-LRR class) fami... 46 2e-05
AT1G59218.1 | Disease resistance protein (CC-NBS-LRR class) fami... 46 2e-05
AT1G58848.2 | Disease resistance protein (CC-NBS-LRR class) fami... 46 2e-05
>AT3G14460.1 | LRR and NB-ARC domains-containing disease resistance
protein | Chr3:4851990-4856264 REVERSE LENGTH=1424 |
201606
Length = 1424
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 1 MTLSFLGKLQCVEKLKIIEFDEVRHIGPEFYGVNNISGGTIFPNLKKLVFVGMDNLEEWE 60
++L +G+L ++ L I +F+ ++ +G +F+ N S G F +L+ L F GM +EW
Sbjct: 798 ISLPPVGQLPSLKYLSIEKFNILQKVGLDFFFGENNSRGVPFQSLQILKFYGMPRWDEW- 856
Query: 61 LRTEEQKQLMPCISTIKLYKCPKLR-ILPSHIPQTIRKLKFSNCP--RLAWGPNSPSSSI 117
+ E + + PC+ + + +CP LR P +P + ++ S+CP ++ G NS S+
Sbjct: 857 ICPELEDGIFPCLQKLIIQRCPSLRKKFPEGLPSST-EVTISDCPLRAVSGGENSFRRSL 915
Query: 118 ITHP 121
P
Sbjct: 916 TNIP 919
>AT1G59218.3 | Disease resistance protein (CC-NBS-LRR class) family
| Chr1:21828398-21831713 FORWARD LENGTH=1049 | 201606
Length = 1049
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 16 KIIEFDEVRHIGPEFYGVNNISGGTIFPNLKKLVFVGMDNLEEWELRTEEQKQLMPCIST 75
+++ E++ + F G + G+ FP L KL +D LEEW + + MP + T
Sbjct: 895 RLVHLKELQLLFRSFSGRIMVCAGSGFPQLHKLKLSELDGLEEWIV----EDGSMPQLHT 950
Query: 76 IKLYKCPKLRILPSHIP 92
+++ +CPKL+ LP+ P
Sbjct: 951 LEIRRCPKLKKLPNGFP 967
>AT1G59218.2 | Disease resistance protein (CC-NBS-LRR class) family
| Chr1:21828398-21831713 FORWARD LENGTH=1049 | 201606
Length = 1049
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 16 KIIEFDEVRHIGPEFYGVNNISGGTIFPNLKKLVFVGMDNLEEWELRTEEQKQLMPCIST 75
+++ E++ + F G + G+ FP L KL +D LEEW + + MP + T
Sbjct: 895 RLVHLKELQLLFRSFSGRIMVCAGSGFPQLHKLKLSELDGLEEWIV----EDGSMPQLHT 950
Query: 76 IKLYKCPKLRILPSHIP 92
+++ +CPKL+ LP+ P
Sbjct: 951 LEIRRCPKLKKLPNGFP 967
>AT1G59218.1 | Disease resistance protein (CC-NBS-LRR class) family
| Chr1:21828398-21831713 FORWARD LENGTH=1049 | 201606
Length = 1049
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 16 KIIEFDEVRHIGPEFYGVNNISGGTIFPNLKKLVFVGMDNLEEWELRTEEQKQLMPCIST 75
+++ E++ + F G + G+ FP L KL +D LEEW + + MP + T
Sbjct: 895 RLVHLKELQLLFRSFSGRIMVCAGSGFPQLHKLKLSELDGLEEWIV----EDGSMPQLHT 950
Query: 76 IKLYKCPKLRILPSHIP 92
+++ +CPKL+ LP+ P
Sbjct: 951 LEIRRCPKLKKLPNGFP 967
>AT1G58848.2 | Disease resistance protein (CC-NBS-LRR class) family
| Chr1:21792140-21795455 FORWARD LENGTH=1049 | 201606
Length = 1049
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 16 KIIEFDEVRHIGPEFYGVNNISGGTIFPNLKKLVFVGMDNLEEWELRTEEQKQLMPCIST 75
+++ E++ + F G + G+ FP L KL +D LEEW + + MP + T
Sbjct: 895 RLVHLKELQLLFRSFSGRIMVCAGSGFPQLHKLKLSELDGLEEWIV----EDGSMPQLHT 950
Query: 76 IKLYKCPKLRILPSHIP 92
+++ +CPKL+ LP+ P
Sbjct: 951 LEIRRCPKLKKLPNGFP 967