BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1410.1
(451 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 351 e-111
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 351 e-111
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 166 1e-48
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 79 3e-17
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 351 bits (900), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/478 (40%), Positives = 273/478 (57%), Gaps = 43/478 (8%)
Query: 4 IGCKWVFRIKKNVDGTISRYKARLVARGFNQVEGIDYEDTFSPVIKSVSIRIILSLALSK 63
IGCKWV++IK N DGTI RYKARLVA+G+ Q EGID+ +TFSPV K S+++IL+++
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 64 GWVLRQLDIKNAFLNGFLKEEVYMCQPPGFI----DSDKPHHVCKLQRSLYGLKQAPRAW 119
+ L QLDI NAFLNG L EE+YM PPG+ DS P+ VC L++S+YGLKQA R W
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246
Query: 120 FERLSTFLLSHGFLASQTDTSLFFKVTSSHAIYILIYVDDIIITGSDPSLVQSTIDTLSS 179
F + S L+ GF+ S +D + F K+T++ + +L+YVDDIII ++ + V L S
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKS 306
Query: 180 EFAISDLGSLNYFLGIEVLPSSNGLLLSQRQYISNLLLKTKMTEAKSVSTPMATNCVLKR 239
F + DLG L YFLG+E+ S+ G+ + QR+Y +LL +T + K S PM +
Sbjct: 307 CFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
Query: 240 NVGDPLSENDTKLYRSTVGALQYATITRPDISFSVNKVCQFLQNPTQDH----------- 288
+ G D K YR +G L Y ITR DISF+VNK+ QF + P H
Sbjct: 367 HSGGDFV--DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYI 424
Query: 289 --------WY-------------ADWAGCPDDRKSTGGILVFMGSNLISWCSKKQTTVAR 327
+Y A + C D R+ST G +F+G++LISW SKKQ V++
Sbjct: 425 KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSK 484
Query: 328 SSTEAEYKAIADATSELIWVQSLFHELGIITKSCPLLWCDNLGATYLTSNPIFHHRMKHV 387
SS EAEY+A++ AT E++W+ F EL + LL+CDN A ++ +N +FH R KH+
Sbjct: 485 SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 544
Query: 388 EIAYHFVRDMVKHQKLQVRHISTHDQLADILTKPLSLSRFSALRSKLNIVSPMLSLQG 445
E H VR+ +Q +D+ D T+ LS LR + + M L G
Sbjct: 545 ESDCHSVRERSVYQATLSYSFQAYDE-QDGFTEYLS----PILRGTIMYIVSMFGLAG 597
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 351 bits (900), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/478 (40%), Positives = 273/478 (57%), Gaps = 43/478 (8%)
Query: 4 IGCKWVFRIKKNVDGTISRYKARLVARGFNQVEGIDYEDTFSPVIKSVSIRIILSLALSK 63
IGCKWV++IK N DGTI RYKARLVA+G+ Q EGID+ +TFSPV K S+++IL+++
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 64 GWVLRQLDIKNAFLNGFLKEEVYMCQPPGFI----DSDKPHHVCKLQRSLYGLKQAPRAW 119
+ L QLDI NAFLNG L EE+YM PPG+ DS P+ VC L++S+YGLKQA R W
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246
Query: 120 FERLSTFLLSHGFLASQTDTSLFFKVTSSHAIYILIYVDDIIITGSDPSLVQSTIDTLSS 179
F + S L+ GF+ S +D + F K+T++ + +L+YVDDIII ++ + V L S
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKS 306
Query: 180 EFAISDLGSLNYFLGIEVLPSSNGLLLSQRQYISNLLLKTKMTEAKSVSTPMATNCVLKR 239
F + DLG L YFLG+E+ S+ G+ + QR+Y +LL +T + K S PM +
Sbjct: 307 CFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
Query: 240 NVGDPLSENDTKLYRSTVGALQYATITRPDISFSVNKVCQFLQNPTQDH----------- 288
+ G D K YR +G L Y ITR DISF+VNK+ QF + P H
Sbjct: 367 HSGGDFV--DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYI 424
Query: 289 --------WY-------------ADWAGCPDDRKSTGGILVFMGSNLISWCSKKQTTVAR 327
+Y A + C D R+ST G +F+G++LISW SKKQ V++
Sbjct: 425 KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSK 484
Query: 328 SSTEAEYKAIADATSELIWVQSLFHELGIITKSCPLLWCDNLGATYLTSNPIFHHRMKHV 387
SS EAEY+A++ AT E++W+ F EL + LL+CDN A ++ +N +FH R KH+
Sbjct: 485 SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 544
Query: 388 EIAYHFVRDMVKHQKLQVRHISTHDQLADILTKPLSLSRFSALRSKLNIVSPMLSLQG 445
E H VR+ +Q +D+ D T+ LS LR + + M L G
Sbjct: 545 ESDCHSVRERSVYQATLSYSFQAYDE-QDGFTEYLS----PILRGTIMYIVSMFGLAG 597
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 166 bits (421), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 130/229 (56%), Gaps = 37/229 (16%)
Query: 151 IYILIYVDDIIITGSDPSLVQSTIDTLSSEFAISDLGSLNYFLGIEVLPSSNGLLLSQRQ 210
+Y+L+YVDDI++TGS +L+ I LSS F++ DLG ++YFLGI++ +GL LSQ +
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 211 YISNLLLKTKMTEAKSVSTPMATNCVLKRNVGDPLSE-NDTKLYRSTVGALQYATITRPD 269
Y +L M + K +STP+ LK N ++ D +RS VGALQY T+TRPD
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLP----LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPD 116
Query: 270 ISFSVNKVCQFLQNPT--------------------------------QDHWYADWAGCP 297
IS++VN VCQ + PT Q +DWAGC
Sbjct: 117 ISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCT 176
Query: 298 DDRKSTGGILVFMGSNLISWCSKKQTTVARSSTEAEYKAIADATSELIW 346
R+ST G F+G N+ISW +K+Q TV+RSSTE EY+A+A +EL W
Sbjct: 177 STRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 79.3 bits (194), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 49/59 (83%)
Query: 2 NIIGCKWVFRIKKNVDGTISRYKARLVARGFNQVEGIDYEDTFSPVIKSVSIRIILSLA 60
NI+GCKWVF+ K + DGT+ R KARLVA+GF+Q EGI + +T+SPV+++ +IR IL++A
Sbjct: 67 NILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125