BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g1440.1
         (514 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C...    76   3e-16
AT3G20980.1 | Gag-Pol-related retrotransposon family protein | C...    46   8e-05

>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
           ChrM:89617-90054 REVERSE LENGTH=145 | 201606
          Length = 145

 Score = 76.3 bits (186), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 3/90 (3%)

Query: 385 GSIKFVKGSLVVMRGTRYGNLYKLLGTTITGDVTVGISGRDPTACTRLWHMRLGHMSENG 444
           G +K +KG   +++G R+ +LY L G+  TG+  +  + +D T   RLWH RL HMS+ G
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDET---RLWHSRLAHMSQRG 83

Query: 445 LSLMCGKGLLKDMKKPCMEFCEHCVFGKAQ 474
           + L+  KG L   K   ++FCE C++GK  
Sbjct: 84  MELLVKKGFLDSSKVSSLKFCEDCIYGKTH 113


>AT3G20980.1 | Gag-Pol-related retrotransposon family protein |
           Chr3:7355963-7357966 FORWARD LENGTH=405 | 201606
          Length = 405

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 12/115 (10%)

Query: 277 VSQDPD---ECFSVTEVSEKISDTWMLDSGASHHMCPNREWFTTYRSIDGGTV--ILGDD 331
           +++ PD   ECFS     E I   W++ S  S+HM P+ ++FTT        V  I GD 
Sbjct: 248 LNEVPDHVAECFSKYTFHENI---WLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDK 304

Query: 332 S---ICKIVGLETIRIKMHDGVVRTLTDVRHIPDLRKNLISLGVLERNGCKIIIE 383
           S   +  + G+  +    ++G  +T+ +V ++P +  N +S+  L+RNG ++ +E
Sbjct: 305 SETTVAMVEGIGDVTFITNEGN-KTIKNVLYVPGIEGNALSVSQLKRNGFEVSME 358

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