BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1470.1
(133 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G16710.1 | Iron-sulfur cluster biosynthesis family protein | ... 218 3e-74
AT2G16710.3 | Iron-sulfur cluster biosynthesis family protein | ... 211 2e-71
AT2G36260.1 | Iron-sulfur cluster biosynthesis family protein | ... 177 2e-58
AT2G16710.2 | Iron-sulfur cluster biosynthesis family protein | ... 162 1e-52
AT1G10500.1 | chloroplast-localized ISCA-like protein | Chr1:346... 79 6e-19
>AT2G16710.1 | Iron-sulfur cluster biosynthesis family protein |
Chr2:7248294-7250013 FORWARD LENGTH=137 | 201606
Length = 137
Score = 218 bits (554), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 120/132 (90%)
Query: 2 ASSVLAAAAGKVGTAMRRQAVSLTDAAADRIRYLLQQRQRQFLKLGVKARGCNGLSYTLN 61
AS +LAAAA +VG A+R+Q ++LTD AA R+ +LLQQRQ+ FL+LGVKARGCNGLSYTLN
Sbjct: 3 ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62
Query: 62 YADEKGKFDEVVEDKGVKILIDPKALMHVIGTKMDFIDDTLKSEFVFINPNSKGECGCGE 121
YADEKGKFDE+VE+KGV+IL++PKALMHVIGTKMDF+DD L+SEFVFINPNS+G+CGCGE
Sbjct: 63 YADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGCGE 122
Query: 122 SFMTTGTSGAAK 133
SFMTT TS A +
Sbjct: 123 SFMTTSTSSAKQ 134
>AT2G16710.3 | Iron-sulfur cluster biosynthesis family protein |
Chr2:7248294-7250013 FORWARD LENGTH=143 | 201606
Length = 143
Score = 211 bits (536), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 120/138 (86%), Gaps = 6/138 (4%)
Query: 2 ASSVLAAAAGKVGTAMRRQAVSLTDAAADRIRYLLQQRQRQFLKLGVKARGCNGLSYTLN 61
AS +LAAAA +VG A+R+Q ++LTD AA R+ +LLQQRQ+ FL+LGVKARGCNGLSYTLN
Sbjct: 3 ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62
Query: 62 YA------DEKGKFDEVVEDKGVKILIDPKALMHVIGTKMDFIDDTLKSEFVFINPNSKG 115
YA DEKGKFDE+VE+KGV+IL++PKALMHVIGTKMDF+DD L+SEFVFINPNS+G
Sbjct: 63 YAGKTSGNDEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQG 122
Query: 116 ECGCGESFMTTGTSGAAK 133
+CGCGESFMTT TS A +
Sbjct: 123 QCGCGESFMTTSTSSAKQ 140
>AT2G36260.1 | Iron-sulfur cluster biosynthesis family protein |
Chr2:15202786-15203500 FORWARD LENGTH=109 | 201606
Length = 109
Score = 177 bits (448), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Query: 17 MRRQAVSLTDAAADRIRYLLQQRQRQFLKLGVKARGCNGLSYTLNYADEKGKFDEVVEDK 76
MR+Q ++L+D AA RIR LLQ +Q+ FL+L V+A+GCNGLSY LNYA EKGKFDEVVE+K
Sbjct: 1 MRKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEK 60
Query: 77 GVKILIDPKALMHVIGTKMDFIDDTLKSEFVFINPNSKGECGCGESFMTT 126
GVKIL+DPKA+MHVIGT+MDF+DD L+SEFVF+NPN+ +CGCGESF TT
Sbjct: 61 GVKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109
>AT2G16710.2 | Iron-sulfur cluster biosynthesis family protein |
Chr2:7248294-7249937 FORWARD LENGTH=110 | 201606
Length = 110
Score = 162 bits (409), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 93/102 (91%)
Query: 2 ASSVLAAAAGKVGTAMRRQAVSLTDAAADRIRYLLQQRQRQFLKLGVKARGCNGLSYTLN 61
AS +LAAAA +VG A+R+Q ++LTD AA R+ +LLQQRQ+ FL+LGVKARGCNGLSYTLN
Sbjct: 3 ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62
Query: 62 YADEKGKFDEVVEDKGVKILIDPKALMHVIGTKMDFIDDTLK 103
YADEKGKFDE+VE+KGV+IL++PKALMHVIGTKMDF+DD L+
Sbjct: 63 YADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLR 104
>AT1G10500.1 | chloroplast-localized ISCA-like protein |
Chr1:3460160-3461340 REVERSE LENGTH=180 | 201606
Length = 180
Score = 78.6 bits (192), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 19 RQAVSLTDAAADRIRYLLQQRQRQF-LKLGVKARGCNGLSYTLNYADEKG--KFDEVVED 75
+ A+SL++ A + + +R L++GVK GC+G+SYT+++ + D +E
Sbjct: 69 KPAISLSENALKHLSKMRSERGEDLCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEY 128
Query: 76 KGVKILIDPKALMHVIGTKMDFIDDTLKSEFVFINPNSKGECGCGESF 123
+G I+ DPK+++ + G ++D+ D + F F NPN+ CGCG+SF
Sbjct: 129 QGFTIVCDPKSMLFLFGMQLDYSDALIGGGFSFSNPNATQTCGCGKSF 176