BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1480.1
(144 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444 REVE... 57 9e-11
AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE ... 57 1e-10
AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825 REVE... 55 2e-10
>AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444
REVERSE LENGTH=141 | 201606
Length = 141
Score = 56.6 bits (135), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 11/79 (13%)
Query: 1 MGSDYIPNYINGGDKLLQVRP--TYENLYKWPESDIEFVKTLSSESSHDCGGGGGNVHRG 58
M S I + +N + VRP TY NLYKWP ++ EFV+++ +HD G+ HR
Sbjct: 1 MASKCIDDCVNIKRDSICVRPVMTYANLYKWPMAEAEFVRSI----NHD-----GSQHRT 51
Query: 59 PQMRKFFSRQRYLRSYTFT 77
+ RQ YLRSYTF+
Sbjct: 52 TVVDSISCRQMYLRSYTFS 70
>AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE
LENGTH=161 | 201606
Length = 161
Score = 57.0 bits (136), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 52/174 (29%)
Query: 1 MGSDYIPNYINGG-DKLLQVRP---TYENLYKWPESDIEFVKTLSSESSHDCGGGGGNVH 56
M S I + IN D + VRP +Y NLYKWPESD EFV+++ GG +
Sbjct: 1 MNSVCISSCINDAHDPRVPVRPVRASYVNLYKWPESDAEFVRSVRR---------GGGLP 51
Query: 57 RGPQMRKFFSRQRYLRSYTFTRK-KEIVSEKIK-----KCLKEVVQRNNKNINVDNNGSG 110
+ RQ YLRSYTF+R+ E SEK+ CL V G+
Sbjct: 52 AARVVDSISCRQMYLRSYTFSREDDESKSEKVSSGTQTSCLGRV------------KGTA 99
Query: 111 GSSVRGKSNKGI------------EQRKVKRS---------LFSLCQRLLSCTS 143
S + K GI E+R+V R + + +RLLSC +
Sbjct: 100 SSRRKSKEENGIIIVESTKPRRRGEKRRVSRKNKQEQACSVILRIFRRLLSCAA 153
>AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825
REVERSE LENGTH=124 | 201606
Length = 124
Score = 55.5 bits (132), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 1 MGSDYIPNYINGGDKLLQVRP--TYENLYKWPESDIEFVKTLSSESSHDCGGGGGNVHRG 58
M S I + +N + + VRP T+ ++KWP +++EFV+++S + G+ R
Sbjct: 1 MASKCIGDCVNIKNNAICVRPGRTHAKIHKWPMAEVEFVQSISQD---------GSPRRT 51
Query: 59 PQMRKFFSRQRYLRSYTFTRKKE 81
+ RQ YLRSYTF+RK+E
Sbjct: 52 TAVESLSCRQMYLRSYTFSRKEE 74