BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1490.1
(122 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE ... 63 2e-13
AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444 REVE... 56 8e-11
AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825 REVE... 54 6e-10
>AT5G02640.1 | hypothetical protein | Chr5:594334-594819 REVERSE
LENGTH=161 | 201606
Length = 161
Score = 63.2 bits (152), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 66/136 (48%), Gaps = 26/136 (19%)
Query: 1 MGSDCISNYANG--DIVLPVAP---TYANLYKWPESDAEFVRTLSNESSSSSSGAGGGAP 55
M S CIS+ N D +PV P +Y NLYKWPESDAEFVR++ GGG P
Sbjct: 1 MNSVCISSCINDAHDPRVPVRPVRASYVNLYKWPESDAEFVRSVRR---------GGGLP 51
Query: 56 MMNDEMRRFLSRQRYLRSYTFT-----TKKETILERTK-KCLNKV-----FQRNKKNMNV 104
+ RQ YLRSYTF+ +K E + T+ CL +V +R K N
Sbjct: 52 AAR-VVDSISCRQMYLRSYTFSREDDESKSEKVSSGTQTSCLGRVKGTASSRRKSKEENG 110
Query: 105 NSVSDSSGSNNNGSKR 120
+ +S+ G KR
Sbjct: 111 IIIVESTKPRRRGEKR 126
>AT3G46300.1 | hypothetical protein | Chr3:17016019-17016444
REVERSE LENGTH=141 | 201606
Length = 141
Score = 56.2 bits (134), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 1 MGSDCISNYAN---GDIVLPVAPTYANLYKWPESDAEFVRTLSNESSSSSSGAGGGAPMM 57
M S CI + N I + TYANLYKWP ++AEFVR+++++ S +
Sbjct: 1 MASKCIDDCVNIKRDSICVRPVMTYANLYKWPMAEAEFVRSINHDGSQHRTTVVDSIS-- 58
Query: 58 NDEMRRFLSRQRYLRSYTFTT 78
RQ YLRSYTF+T
Sbjct: 59 --------CRQMYLRSYTFST 71
>AT3G46310.1 | hypothetical protein | Chr3:17017451-17017825
REVERSE LENGTH=124 | 201606
Length = 124
Score = 53.5 bits (127), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 1 MGSDCIS---NYANGDIVLPVAPTYANLYKWPESDAEFVRTLSNESSSSSSGAGGGAPMM 57
M S CI N N I + T+A ++KWP ++ EFV+++S + G+P
Sbjct: 1 MASKCIGDCVNIKNNAICVRPGRTHAKIHKWPMAEVEFVQSISQD----------GSPRR 50
Query: 58 NDEMRRFLSRQRYLRSYTFTTKKE 81
+ RQ YLRSYTF+ K+E
Sbjct: 51 TTAVESLSCRQMYLRSYTFSRKEE 74