BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1620.1
(222 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25270.1 | Ribonuclease H-like superfamily protein | Chr3:920... 74 3e-15
AT2G46460.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 64 1e-12
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 66 1e-12
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 66 2e-12
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 64 7e-12
>AT3G25270.1 | Ribonuclease H-like superfamily protein |
Chr3:9203934-9204965 REVERSE LENGTH=343 | 201606
Length = 343
Score = 73.6 bits (179), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 15/223 (6%)
Query: 1 MWYMWKARNKLVFEGTPYQSRQIISEAINMVNDFS-----FDSMNPMIMSDEQQVPHIPL 55
+W +WK+RN+LVF+ + + A N V ++ S+N + S Q P +
Sbjct: 124 LWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMAR 183
Query: 56 --WTPPPNEGLKINFDAAY--REGKASIAAVCRNKDGEMVMTLLQA--SNASSAVEAEAK 109
W PP+ +K N+D A+ + A + R+++G + M QA S S ++E+E +
Sbjct: 184 TKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENG-VYMGSGQAIGSTTSDSLESEFQ 242
Query: 110 ATQLALKIAPDLYQYKCIIEGDAMNVIKACSEKEDNIPWMIRSLVMDIQKSASRVQGCSF 169
A +A++ A K I EGD+ V + + ++ N + + + + R + F
Sbjct: 243 ALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEKLNFGRF--NWIREGRFWQKRFEEAVF 300
Query: 170 SYCLRTANQVAHLLAHSKLTDNVDVPLEFYVAPNCIVSQLAID 212
+ RT NQ A +LA L N +YV P I S L D
Sbjct: 301 KWVPRTNNQPADILAKHHLQPNQSFKFHYYV-PAFITSTLYYD 342
>AT2G46460.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:19071537-19072019 FORWARD
LENGTH=160 | 201606
Length = 160
Score = 63.9 bits (154), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 56 WTPPPNEGLKINFDAAY-REGKASIAAVCRNKDGEMVMTLLQASN-ASSAVEAEAKATQL 113
WT PP+ K N+D +Y RE + + R++ G+ V N S+A+E+E +A +
Sbjct: 3 WTRPPHGWKKCNYDGSYNREMPSKAGWIIRDESGQFVSAGQATGNHTSNALESEFQALLI 62
Query: 114 ALKIAPDLYQYKCIIEGDAMNVIKACSEKEDNIPWMIRSLVMDIQKSASRVQGCSFSYCL 173
++ K EGD V++ + ++ I + + D+Q R Q C F++
Sbjct: 63 TMQSCWSHGHRKIWFEGDNREVMEILNRRKSRFD--IFNWIRDVQAWKQRFQECRFTWIN 120
Query: 174 RTANQVAHLLAHSKLTDNVDVPLEFYVAPNCIVSQLAIDKA 214
R N+ A +LA S L N Y+ P I S L ++ +
Sbjct: 121 RKQNKPADILAKSHLPQNEQFKFYDYI-PIVISSALQLENS 160
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 65.9 bits (159), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 6/213 (2%)
Query: 1 MWYMWKARNKLVFEGTPYQSRQIISEAINMVNDFSFDSMNPMIMSDEQQVPHIPL-WTPP 59
+W +WK+RN+L+F+G Y + +++ A+ ++S S Q ++ + W P
Sbjct: 81 LWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQVERNLSVQWKAP 140
Query: 60 PNEGLKINFDAAYR--EGKASIAAVCRNKDGEMVMTLLQA-SNASSAVEAEAKATQLALK 116
P + +K N DA ++ + I + RN+ G ++ +A + +EAE +A + A+
Sbjct: 141 PYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEALRWAVL 200
Query: 117 IAPDLYQYKCIIEGDAMNVIKACSEKEDNIPWMIRSLVMDIQKSASRVQGCSFSYCLRTA 176
+ I E DA ++ + +D P ++ + DIQ+ + F + R
Sbjct: 201 TMSRFNYKRIIFESDAQALVNLLN-SDDFWP-TLQPALEDIQQLLHHFEEVKFEFTPRGG 258
Query: 177 NQVAHLLAHSKLTDNVDVPLEFYVAPNCIVSQL 209
N+VA +A ++ + P F + P + S L
Sbjct: 259 NKVADRIARESISFSNYDPKLFSIVPQWLRSTL 291
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 65.9 bits (159), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 1 MWYMWKARNKLVFEGTPYQSRQIISEAINMVNDFSFDSMNPMIMSDEQ-QVPHIPLWTPP 59
+W +WK RN+LVF G + +++++ A + + ++ + + Q W PP
Sbjct: 364 LWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPP 423
Query: 60 PNEGLKINFDAAYREG--KASIAAVCRNKDGEMVMTLLQA-SNASSAVEAEAKATQLALK 116
P++ +K N DA + + I V RN+ GE+ +A S +EAE +A + A+
Sbjct: 424 PHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAV- 482
Query: 117 IAPDLYQYKCII-EGDAMNVIKACSEKEDNIPWMIRSLVMDIQKSASRVQGCSFSYCLRT 175
++ +QY +I E D+ +I+ + D I ++ + D+Q+ S+ F + R
Sbjct: 483 LSLSRFQYNYVIFESDSQVLIEILN--NDEIWPSLKPTIQDLQRLLSQFTEVKFVFIPRE 540
Query: 176 ANQVAHLLAHSKLT 189
N +A +A L+
Sbjct: 541 GNTLAERVARESLS 554
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 63.5 bits (153), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 1 MWYMWKARNKLVFEGTPYQSRQIISEAINMVNDFSFDSMNPMIMSDEQQVPHI------- 53
MW +WK+ N LVF T + + + A+N ++ ++ M++EQQ +
Sbjct: 48 MWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNT-----MTNEQQNGNRNADPSRN 102
Query: 54 PLWTPPPNEGLKINFDAAYREGK--ASIAAVCRNKDGEMV---MTLLQASNASSAVEAEA 108
W+PP + LK N+DA++ E + + + RN G ++ M Q + EAE
Sbjct: 103 TKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTE--EAEC 160
Query: 109 KATQLALKIAPDLYQYKCIIEGDAMNVIKACSEKEDNIPWMIRSLVMDIQKSASRVQGCS 168
A++ + K I EGD + + + K N ++ + IQ +
Sbjct: 161 STLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSNP--RLQHFLDTIQSWIPSFESIE 218
Query: 169 FSYCLRTANQVAHLLAHSKLTDNVDVPLEFYVAP 202
FS+ R N A LA + +N L F+ P
Sbjct: 219 FSFKHREQNGCADFLAKQAIKENTQWSL-FHSCP 251