BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1730.1
(239 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G63520.1 | carotenoid cleavage dioxygenase 1 | Chr3:23452940-... 292 2e-96
AT4G19170.1 | nine-cis-epoxycarotenoid dioxygenase 4 | Chr4:1048... 114 1e-28
AT3G24220.1 | nine-cis-epoxycarotenoid dioxygenase 6 | Chr3:8761... 109 3e-27
AT1G78390.1 | nine-cis-epoxycarotenoid dioxygenase 9 | Chr1:2949... 100 6e-24
AT1G30100.1 | nine-cis-epoxycarotenoid dioxygenase 5 | Chr1:1057... 97 6e-23
>AT3G63520.1 | carotenoid cleavage dioxygenase 1 |
Chr3:23452940-23455896 FORWARD LENGTH=538 | 201606
Length = 538
Score = 292 bits (748), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/308 (54%), Positives = 196/308 (63%), Gaps = 76/308 (24%)
Query: 1 MFTFGYSHTPPYCTYRVISKDG--------------FMHD-----------PVPI----- 30
MFTFGYSHTPPY TYRVISKDG MHD +P+
Sbjct: 232 MFTFGYSHTPPYLTYRVISKDGIMHDPVPITISEPIMMHDFAITETYAIFMDLPMHFRPK 291
Query: 31 -TISEPVMMHDFAITENYAIFMDLPLYFRPKKTI------SVGLFISSSAFR-------- 75
+ E M++ F T+ A F LP Y + + I + +F +++A+
Sbjct: 292 EMVKEKKMIYSFDPTKK-ARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEEDEVVLI 350
Query: 76 ---------------------------YEMRFNMKNGLATQKKLSASAVDFPRVNESYTG 108
YEMRFNMK G A+QKKLSASAVDFPR+NE YTG
Sbjct: 351 TCRLENPDLDMVSGKVKEKLENFGNELYEMRFNMKTGSASQKKLSASAVDFPRINECYTG 410
Query: 109 RKQRFVYGTILDSIAKVTGIIKFDLHSEPDNEKTQFEVGGNVQGIFDLGPGRFGSEAVFV 168
+KQR+VYGTILDSIAKVTGIIKFDLH+E + K EVGGN++GI+DLG GR+GSEA++V
Sbjct: 411 KKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRMLEVGGNIKGIYDLGEGRYGSEAIYV 470
Query: 169 PREPGITSEEDDGYLIFFVHDENTGKSAVNVIDAKTMSADPVAVVELPNRVPYGFHAFFV 228
PRE T+EEDDGYLIFFVHDENTGKS V VIDAKTMSA+PVAVVELP+RVPYGFHA FV
Sbjct: 471 PRE---TAEEDDGYLIFFVHDENTGKSCVTVIDAKTMSAEPVAVVELPHRVPYGFHALFV 527
Query: 229 TEEQLQEQ 236
TEEQLQEQ
Sbjct: 528 TEEQLQEQ 535
>AT4G19170.1 | nine-cis-epoxycarotenoid dioxygenase 4 |
Chr4:10481835-10483622 FORWARD LENGTH=595 | 201606
Length = 595
Score = 114 bits (284), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 73 AFRYEMRFNMKNGLATQKKLSASAVDFPRVNESYTGRKQRFVYGTILDSIAKVTGIIKFD 132
A +++ ++ G+ + +SA +DF +N ++ GR R+VY I D + K++G++K D
Sbjct: 439 ALVEKVKIDLVTGIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISGVVKLD 498
Query: 133 LHSEPDNEKTQFEVGGNVQGIFDLGPGRFGSEAVFVPREPG-ITSEEDDGYLIFFVHDEN 191
+ ++ V + G G +G E FV R+PG +EEDDGY++ +VHDE
Sbjct: 499 VSK---GDRDDCTVARRM-----YGSGCYGGEPFFVARDPGNPEAEEDDGYVVTYVHDEV 550
Query: 192 TGKSAVNVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEEQLQE 235
TG+S V+DAK+ + VA V LP RVPYGFH FV E L +
Sbjct: 551 TGESKFLVMDAKSPELEIVAAVRLPRRVPYGFHGLFVKESDLNK 594
>AT3G24220.1 | nine-cis-epoxycarotenoid dioxygenase 6 |
Chr3:8761439-8763172 FORWARD LENGTH=577 | 201606
Length = 577
Score = 109 bits (273), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 87/161 (54%), Gaps = 19/161 (11%)
Query: 77 EMRFNMKNGLATQKKL-SASAVDFPRVNESYTGRKQRFVYGTILDSIAKVTGIIKFDLHS 135
E+R NM+ + +K + + ++ +N SY GRK +FVY I D K +GI K D+ +
Sbjct: 433 EIRLNMRTKESNRKVIVTGVNLEAGHINRSYVGRKSQFVYIAIADPWPKCSGIAKVDIQN 492
Query: 136 EPDNEKTQFEVGGNVQGIFDLGPGRFGSEAVFVPREPGITSEEDDGYLIFFVHDENTGKS 195
+E F+ GP RFG E FVP G EED GY++ FV DE +S
Sbjct: 493 GTVSE-------------FNYGPSRFGGEPCFVPEGEG---EEDKGYVMGFVRDEEKDES 536
Query: 196 AVNVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEEQLQEQ 236
V+DA M VA V LP RVPYGFH FV+E QL+EQ
Sbjct: 537 EFVVVDATDMKQ--VAAVRLPERVPYGFHGTFVSENQLKEQ 575
>AT1G78390.1 | nine-cis-epoxycarotenoid dioxygenase 9 |
Chr1:29490895-29492868 REVERSE LENGTH=657 | 201606
Length = 657
Score = 100 bits (249), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 20/163 (12%)
Query: 77 EMRFNMKNGLATQKKLSASAVDFPR--VNESYTGRKQRFVYGTILDSIAKVTGIIKFDLH 134
E+R N+K G +T++ + + V+ VN + GRK R+ Y + + KV+G K DL
Sbjct: 511 EIRLNLKTGESTRRPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSGFAKVDLS 570
Query: 135 SEPDNEKTQFEVGGNVQGIFDLGPGRFGSEAVFVPREPGITSEEDDGYLIFFVHDENTGK 194
+ G ++ + G G++G E +F+P G EED GY++ FVHDE K
Sbjct: 571 T------------GEIRK-YIYGEGKYGGEPLFLPSGDG---EEDGGYIMVFVHDEEKVK 614
Query: 195 SAVNVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEEQLQEQA 237
S + +I+A M + A V LP+RVPYGFH F+++E L +QA
Sbjct: 615 SELQLINAVNMKLE--ATVTLPSRVPYGFHGTFISKEDLSKQA 655
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 11 PYCTYRVISKDGFMHDPVPITISEPVMMHDFAITENYAIFMDLPLYFRPKKTISVGLFIS 70
PY Y + DG V I + +P M+HDFAITEN+ + D + FR + I G
Sbjct: 378 PYLKYFRFTSDGEKSPDVEIPLDQPTMIHDFAITENFVVIPDQQVVFRLPEMIRGG---- 433
Query: 71 SSAFRYEMRFNMKNGLATQKKLSASAVDFPRVNESYT 107
S Y+ + + G+ + AS++ + V + +
Sbjct: 434 -SPVVYDEKKKSRFGILNKNAKDASSIQWIEVPDCFC 469
>AT1G30100.1 | nine-cis-epoxycarotenoid dioxygenase 5 |
Chr1:10571383-10573152 FORWARD LENGTH=589 | 201606
Length = 589
Score = 97.4 bits (241), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 22/166 (13%)
Query: 77 EMRFNMKNGLATQKKLSASAVDFP----RVNESYTGRKQRFVYGTILDSIAKVTGIIKFD 132
E+R N+K G +T++ + +V VN + GRK R+ Y I + KV+G K D
Sbjct: 441 EIRLNLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVD 500
Query: 133 LHSEPDNEKTQFEVGGNVQGIFDLGPGRFGSEAVFVPREPGITSE-EDDGYLIFFVHDEN 191
L + G V+ F G ++G E F+PR G+ S+ EDDGY++ FVHDE
Sbjct: 501 LST------------GEVKNHF-YGGKKYGGEPFFLPR--GLESDGEDDGYIMSFVHDEE 545
Query: 192 TGKSAVNVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEEQLQEQA 237
+ +S +++++A T+ + A V+LP+RVPYGFH FV + QA
Sbjct: 546 SWESELHIVNAVTLELE--ATVKLPSRVPYGFHGTFVNSADMLNQA 589