BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1740.1
(204 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G07985.1 | Expressed protein | Chr1:2475508-2475942 FORWARD L... 42 7e-05
>AT1G07985.1 | Expressed protein | Chr1:2475508-2475942 FORWARD
LENGTH=144 | 201606
Length = 144
Score = 42.0 bits (97), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 51/139 (36%)
Query: 1 MGVIVEGEEPIVSRLDRLDNLLRHMEEMR---RAGYYNNTSKCSLSPRSSCESSPRSSRT 57
M V+ EEPI+SRLDR+D ++R +EEM+ +T P S SSPRS
Sbjct: 1 MAVV---EEPILSRLDRIDFMVRKLEEMKGSSPRSSSPSTPSSGTQPSSMDLSSPRS--- 54
Query: 58 TLTNSTTGATDHHGGGFSSTVDGANSSSSSSSVESSPNYRNNNLEKYCRPIETVIMDTQM 117
G +CR +E V +T+
Sbjct: 55 ------IGKV------------------------------------HCRSMEQVREETER 72
Query: 118 KGNLFDRLLHLEDRVLKIC 136
KG L +RL ++E++VLK+C
Sbjct: 73 KGTLLERLNNVEEQVLKLC 91