BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g1750.1
         (255 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63540.1 | thylakoid lumenal protein (Mog1/PsbP/DUF1795-like ...   236   1e-79
AT1G77090.1 | thylakoid lumenal protein (Mog1/PsbP/DUF1795-like ...    51   2e-07

>AT3G63540.1 | thylakoid lumenal protein (Mog1/PsbP/DUF1795-like
           photosystem II reaction center PsbP family protein) |
           Chr3:23459372-23459803 REVERSE LENGTH=143 | 201606
          Length = 143

 Score =  236 bits (602), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 107/138 (77%), Positives = 123/138 (89%)

Query: 116 EVPDGWKERLVSKIEKGTNGTDSEFYNPKKKTEKEYLTFLSGIRQLAPKEVILNNLALSD 175
           EV +GWKERLVSK+EKGTNGTDSEFYNPKKKTEKEYLTFL+G RQLAP++VILNNLALSD
Sbjct: 3   EVEEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKEYLTFLAGFRQLAPRDVILNNLALSD 62

Query: 176 VVLQDLISGAESVTTKEMKTEDGQVYYVYEIEGSGAHSLISVTCARNKLYAHFVNAPTME 235
           V LQDLI+GA+ V ++E K E GQVYY+YEI+G G HSLI+VTC++NKLYAHFVNAP  E
Sbjct: 63  VELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSKNKLYAHFVNAPAPE 122

Query: 236 WNRDKDMLTHIHESFKTV 253
           WNRD D LTH+ +SFKTV
Sbjct: 123 WNRDHDTLTHLRDSFKTV 140


>AT1G77090.1 | thylakoid lumenal protein (Mog1/PsbP/DUF1795-like
           photosystem II reaction center PsbP family protein) |
           Chr1:28960576-28961875 REVERSE LENGTH=260 | 201606
          Length = 260

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 113 YIYEVPDGWKERLVSKIEKGTNGTDSEFYNPKKKTEKEYLTFLSGIRQLAPK---EVILN 169
           Y + VP  W E  VS  + G    D  F +PK   E      ++ + + A     +V + 
Sbjct: 116 YAFSVPQDWNEVPVSIADLGGTEIDLRFASPK---EGRLSVIVAPVLRFADNLGDDVKIE 172

Query: 170 NL--------ALSDVVLQDLISGAESVTTKEMKTEDGQVYYVYEIEGSGAHSLISVTCAR 221
           N+        A    V+ + + G   V +  +   DG++YY +E+E    H LI+ T A 
Sbjct: 173 NIGQPAKVINAFGPEVIGENVEG--KVLSSNVAEHDGRLYYQFELEP--PHVLITATAAG 228

Query: 222 NKLYAHFVNAPTMEWNRDKDMLTHIHESFKTV 253
           N+LY   V    ++W R    L  I  SF+ V
Sbjct: 229 NRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260

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