BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1790.1
(394 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57890.1 | Tubulin binding cofactor C domain-containing prote... 598 0.0
AT3G57890.2 | Tubulin binding cofactor C domain-containing prote... 597 0.0
AT2G42230.2 | C-CAP/cofactor C-like domain-containing protein | ... 585 0.0
AT2G42230.1 | C-CAP/cofactor C-like domain-containing protein | ... 362 e-123
AT4G39920.1 | C-CAP/cofactor C-like domain-containing protein | ... 49 4e-06
>AT3G57890.1 | Tubulin binding cofactor C domain-containing protein
| Chr3:21438271-21441695 FORWARD LENGTH=573 | 201606
Length = 573
Score = 598 bits (1542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 280/397 (70%), Positives = 331/397 (83%), Gaps = 5/397 (1%)
Query: 1 MPSQSDEEAHQLSYLQKHLANILSLLADSVEGEEDESLVLTLERFECLGFLIQFGEKGSD 60
MPSQ+D+EAHQLSYLQKHLANI+SLLA+ VEGE DESLV ++E FE L FL+QFG+KGSD
Sbjct: 179 MPSQADDEAHQLSYLQKHLANIISLLAEPVEGEGDESLVFSMEAFEHLRFLVQFGDKGSD 238
Query: 61 RIPLSQAAPFFANSDPDMPAVPVPAGQVHDWILQNIEAALE---QKVSSKENGSTTAADQ 117
PLSQA PFFANSDPDMPAVPVPA QVHDW+LQNI +ALE +++S KENG + DQ
Sbjct: 239 VSPLSQATPFFANSDPDMPAVPVPASQVHDWLLQNIASALESITERISGKENGPSN--DQ 296
Query: 118 DVAMADSGTSLCKGLNEGRSQSFVEGISKTSVVKQASDLKGSSVKVLNCQDSVVYILAPL 177
D AM+D + K R +EG+SKTS+VKQASDL+G SVKV+NC DSV+Y+LAPL
Sbjct: 297 DDAMSDVCAAPNKVAPSTRGPCLIEGVSKTSLVKQASDLRGRSVKVVNCHDSVIYLLAPL 356
Query: 178 KYATIYGCSDATIVLGAIGKAVRVEHCERVQVIVAAKRISIANCRECVFFIGVNQRPLIL 237
+YAT++GCSD TIVLGA+GKA++VEHCERV VIVAAKR+ IANCRECVFF+GVNQRPLI+
Sbjct: 357 RYATVHGCSDTTIVLGAVGKAIKVEHCERVHVIVAAKRVCIANCRECVFFLGVNQRPLIV 416
Query: 238 GDNHKLQVAPYNTFYLQLEEHMTQVGVDATTNKWNEPLVLGVVDPHDSLSHPAGVSDVQA 297
GDNHKLQVAPYNTFY LEEHM +VG++ T NKW++PL LG VDPHDSLSHPAGV+D QA
Sbjct: 417 GDNHKLQVAPYNTFYSHLEEHMREVGLEPTINKWDKPLALGAVDPHDSLSHPAGVADAQA 476
Query: 298 ESATFLNPDQFTNFLIPNWYGGESPHPTKHNPFALPDVYMASQQKNRQSLEEIKQALRDA 357
ESA ++PDQF NFLIPNW+ G TK NPF LPD YMA+QQ+N ++ EE +++L++A
Sbjct: 477 ESAASVDPDQFVNFLIPNWFSGAELGSTKDNPFPLPDAYMAAQQRNLKNFEETRRSLKEA 536
Query: 358 QLEENRKKELVGALHVLFKDWLYASGNIRQLYCLQGD 394
LEENRK+EL ALHV FKDWLYASGNIRQLYCLQGD
Sbjct: 537 PLEENRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 573
>AT3G57890.2 | Tubulin binding cofactor C domain-containing protein
| Chr3:21438271-21441695 FORWARD LENGTH=609 | 201606
Length = 609
Score = 597 bits (1538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 280/397 (70%), Positives = 331/397 (83%), Gaps = 5/397 (1%)
Query: 1 MPSQSDEEAHQLSYLQKHLANILSLLADSVEGEEDESLVLTLERFECLGFLIQFGEKGSD 60
MPSQ+D+EAHQLSYLQKHLANI+SLLA+ VEGE DESLV ++E FE L FL+QFG+KGSD
Sbjct: 215 MPSQADDEAHQLSYLQKHLANIISLLAEPVEGEGDESLVFSMEAFEHLRFLVQFGDKGSD 274
Query: 61 RIPLSQAAPFFANSDPDMPAVPVPAGQVHDWILQNIEAALE---QKVSSKENGSTTAADQ 117
PLSQA PFFANSDPDMPAVPVPA QVHDW+LQNI +ALE +++S KENG + DQ
Sbjct: 275 VSPLSQATPFFANSDPDMPAVPVPASQVHDWLLQNIASALESITERISGKENGPSN--DQ 332
Query: 118 DVAMADSGTSLCKGLNEGRSQSFVEGISKTSVVKQASDLKGSSVKVLNCQDSVVYILAPL 177
D AM+D + K R +EG+SKTS+VKQASDL+G SVKV+NC DSV+Y+LAPL
Sbjct: 333 DDAMSDVCAAPNKVAPSTRGPCLIEGVSKTSLVKQASDLRGRSVKVVNCHDSVIYLLAPL 392
Query: 178 KYATIYGCSDATIVLGAIGKAVRVEHCERVQVIVAAKRISIANCRECVFFIGVNQRPLIL 237
+YAT++GCSD TIVLGA+GKA++VEHCERV VIVAAKR+ IANCRECVFF+GVNQRPLI+
Sbjct: 393 RYATVHGCSDTTIVLGAVGKAIKVEHCERVHVIVAAKRVCIANCRECVFFLGVNQRPLIV 452
Query: 238 GDNHKLQVAPYNTFYLQLEEHMTQVGVDATTNKWNEPLVLGVVDPHDSLSHPAGVSDVQA 297
GDNHKLQVAPYNTFY LEEHM +VG++ T NKW++PL LG VDPHDSLSHPAGV+D QA
Sbjct: 453 GDNHKLQVAPYNTFYSHLEEHMREVGLEPTINKWDKPLALGAVDPHDSLSHPAGVADAQA 512
Query: 298 ESATFLNPDQFTNFLIPNWYGGESPHPTKHNPFALPDVYMASQQKNRQSLEEIKQALRDA 357
ESA ++PDQF NFLIPNW+ G TK NPF LPD YMA+QQ+N ++ EE +++L++A
Sbjct: 513 ESAASVDPDQFVNFLIPNWFSGAELGSTKDNPFPLPDAYMAAQQRNLKNFEETRRSLKEA 572
Query: 358 QLEENRKKELVGALHVLFKDWLYASGNIRQLYCLQGD 394
LEENRK+EL ALHV FKDWLYASGNIRQLYCLQGD
Sbjct: 573 PLEENRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 609
>AT2G42230.2 | C-CAP/cofactor C-like domain-containing protein |
Chr2:17593705-17596563 REVERSE LENGTH=568 | 201606
Length = 568
Score = 585 bits (1508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 272/397 (68%), Positives = 325/397 (81%), Gaps = 3/397 (0%)
Query: 1 MPSQSDEEAHQLSYLQKHLANILSLLADSVEGEEDESLVLTLERFECLGFLIQFGEKGSD 60
MPS +DEEAHQLSYLQKH+ANI+SLLA+ VEG+ D+SLVL++E E +GFL+ +G+KG D
Sbjct: 172 MPSPTDEEAHQLSYLQKHIANIISLLAEPVEGQGDDSLVLSMESLEHIGFLVHYGDKGFD 231
Query: 61 RIPLSQAAPFFANSDPDMPAVPVPAGQVHDWILQNIEAALE---QKVSSKENGSTTAADQ 117
LSQA PFFANSDPDMPAVPVPA QV+DW+L++I +ALE ++S KENG++ A+DQ
Sbjct: 232 VPSLSQATPFFANSDPDMPAVPVPASQVNDWLLKDIASALESISNRISGKENGASNASDQ 291
Query: 118 DVAMADSGTSLCKGLNEGRSQSFVEGISKTSVVKQASDLKGSSVKVLNCQDSVVYILAPL 177
+ AMADS +L K + R +EG+SKTS+ KQASDLKG SVKV NC DSV+Y+LAPL
Sbjct: 292 NAAMADSSVALNKVSSNDRGPCIIEGVSKTSLFKQASDLKGRSVKVANCHDSVIYLLAPL 351
Query: 178 KYATIYGCSDATIVLGAIGKAVRVEHCERVQVIVAAKRISIANCRECVFFIGVNQRPLIL 237
+YAT+YGCSD+TIVLGA GKAV+VEHCERV VIVA KRI IANCRECVFF+GVNQRPLI+
Sbjct: 352 RYATVYGCSDSTIVLGAAGKAVKVEHCERVHVIVATKRICIANCRECVFFLGVNQRPLIV 411
Query: 238 GDNHKLQVAPYNTFYLQLEEHMTQVGVDATTNKWNEPLVLGVVDPHDSLSHPAGVSDVQA 297
GDNHKLQVAPYNTFY LEEH+T+VG+ T NKWNE L LG +DPHDSLSHP G SD QA
Sbjct: 412 GDNHKLQVAPYNTFYSHLEEHITEVGIQPTINKWNESLALGAIDPHDSLSHPTGASDKQA 471
Query: 298 ESATFLNPDQFTNFLIPNWYGGESPHPTKHNPFALPDVYMASQQKNRQSLEEIKQALRDA 357
E A+ ++PDQFT FLIPNW+ GE+ TK NPF LPD Y A QQ N ++LEE +Q+LR+
Sbjct: 472 EPASCVDPDQFTTFLIPNWFAGEAIGSTKDNPFPLPDAYKAVQQTNLKNLEETRQSLRET 531
Query: 358 QLEENRKKELVGALHVLFKDWLYASGNIRQLYCLQGD 394
LEENRK+EL A H+ FKDWLYA+GNIRQLYCLQGD
Sbjct: 532 PLEENRKRELTTAFHMYFKDWLYATGNIRQLYCLQGD 568
>AT2G42230.1 | C-CAP/cofactor C-like domain-containing protein |
Chr2:17594579-17596563 REVERSE LENGTH=419 | 201606
Length = 419
Score = 362 bits (929), Expect = e-123, Method: Compositional matrix adjust.
Identities = 171/247 (69%), Positives = 207/247 (83%), Gaps = 3/247 (1%)
Query: 1 MPSQSDEEAHQLSYLQKHLANILSLLADSVEGEEDESLVLTLERFECLGFLIQFGEKGSD 60
MPS +DEEAHQLSYLQKH+ANI+SLLA+ VEG+ D+SLVL++E E +GFL+ +G+KG D
Sbjct: 172 MPSPTDEEAHQLSYLQKHIANIISLLAEPVEGQGDDSLVLSMESLEHIGFLVHYGDKGFD 231
Query: 61 RIPLSQAAPFFANSDPDMPAVPVPAGQVHDWILQNIEAALE---QKVSSKENGSTTAADQ 117
LSQA PFFANSDPDMPAVPVPA QV+DW+L++I +ALE ++S KENG++ A+DQ
Sbjct: 232 VPSLSQATPFFANSDPDMPAVPVPASQVNDWLLKDIASALESISNRISGKENGASNASDQ 291
Query: 118 DVAMADSGTSLCKGLNEGRSQSFVEGISKTSVVKQASDLKGSSVKVLNCQDSVVYILAPL 177
+ AMADS +L K + R +EG+SKTS+ KQASDLKG SVKV NC DSV+Y+LAPL
Sbjct: 292 NAAMADSSVALNKVSSNDRGPCIIEGVSKTSLFKQASDLKGRSVKVANCHDSVIYLLAPL 351
Query: 178 KYATIYGCSDATIVLGAIGKAVRVEHCERVQVIVAAKRISIANCRECVFFIGVNQRPLIL 237
+YAT+YGCSD+TIVLGA GKAV+VEHCERV VIVA KRI IANCRECVFF+GVNQRPLI+
Sbjct: 352 RYATVYGCSDSTIVLGAAGKAVKVEHCERVHVIVATKRICIANCRECVFFLGVNQRPLIV 411
Query: 238 GDNHKLQ 244
GDNHKLQ
Sbjct: 412 GDNHKLQ 418
>AT4G39920.1 | C-CAP/cofactor C-like domain-containing protein |
Chr4:18515882-18516919 FORWARD LENGTH=345 | 201606
Length = 345
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 131 GLNEGRSQSFVEGISKTSVVK-QASDLKGSSVKVLNCQDSVVYILAPLKYATIYGCSDAT 189
GL ++ V+ +S+ + SDL VK+ +++ L LK ++Y
Sbjct: 180 GLRNKHGETLVKSFEGSSIGEFTLSDLDSCQVKLTGTVNAL--FLHRLKKCSVYT----- 232
Query: 190 IVLGAIGKAVRVEHCERVQVIVAAKRISIANCRECVFFIGVNQRPLILGDNHKLQVAPYN 249
G + ++ ++ E +++A+ +I I R+ F++ V RP+I D++ ++ APY
Sbjct: 233 ---GPVIGSILIDDVEDCVLVLASHQIRIHCARKSDFYLRVRSRPII-EDSNGVRFAPYC 288
Query: 250 TFYLQLEEHMTQVGVDATTNKW 271
Y ++E + G++ TN W
Sbjct: 289 LDYKGIDEDLKTAGLEEETNNW 310